| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6427 |
|---|
| Symbol | dnaK |
|---|
| ID | 8337791 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 7416053 |
|---|
| End bp | 7417963 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644959527 |
|---|
| Product | molecular chaperone DnaK |
|---|
| Protein accession | YP_003117120 |
|---|
| Protein GI | 256395556 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0443] Molecular chaperone |
|---|
| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.602415 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGG CGGTAGGCAT CGACCTGGGA ACCACCAACT CGGTCATCGC GGTCTGGGAG
GGCGGCGAGG CACGGGTCAT ACCGAACACC GAGGGTTCGC GGACCACCCC CTCCGTCGTC
GGCTTCACCG AGGACGGCGA GCGCCTGGTC GGCCAGCTCG CCCGGCGTCA GGCGATCCTC
AACCCCAAGG GCACCATCTA CTCCGCCAAG CGCTTCATCG GGCGGCACTT CGACGAGATC
TCCGCCGAGG CCAAGGCGGT GGCGTTCGAC GTCGTCGAAG GGCCCGGCGG CGCGGCCCGC
TTCGACGTGC GCGGCAAGCT CTACGCCCCC GAGGAGATCA GTGCCCTGGT ACTGCGCAAG
CTGGCCGAGG ACGCCTCCAA GTCCCTCGGC GAGAAGGTCA CCGAGGCGGT GATCACGGTC
CCGGCCTACT TCAACGACGC CCAGCGCACC GCCACCAAGG ACGCCGGGAA GATCGCCGGC
CTGGAGGTCC TGCGCATCAT CAACGAGCCC ACCGCCGCGG CCCTGGCCTA CGGCCTGGAC
AAGAAGGGGC ACGAGACGGT CCTGGTCTTC GACCTCGGCG GCGGCACGTT CGACGTCAGC
ATCCTCGACG TCGGCGACGG CGTCGTGGAG GTCCGCTCCA CGGCCGGCGA CACCCACCTC
GGCGGCGATG ACTTCGACCG CCGTCTGGTC GACCACATCG CCGATGAGTT CCAGAAGGGG
AACGGCATCG ATCTGCGCGA GGACCCCCAG GCCCTGCAGC GTCTGTTCGA GGCCGCAGAG
AAGGCCAAGA CCGAGCTGAG CTCGGTCACC CAGACGCAGA TCAACCTCCC CTTCATCACC
GCCGACGCCT CCGGCCCCAA GCACGTGACC CAGACCATCC GCCGCTCCAC CTTCGAGGAG
ATCACCGCCG ACCTGGTGGA GCGCTGCCTC GGGCCGGTCA AGCAGGCGAT GGCCGACGCC
AAGGTCACCG CGAACGACAT CGACGAGGTG ATCCTGGTCG GCGGCTCCAC CCGGATCCCG
GCGGTCCAGG CGCTGGTCCG CAAGCTGACC GGCGGCAAGG ACCCCAACAT GACCGTCAAC
CCCGACGAGG TGGTGGCGCT CGGCGCCGCC GTCCAGGCCG GGGTGCTCAA GGGCGAGGTC
AAGGACGTCC TGCTGCTCGA CGTCACACCG CTGTCCCTCG GCGTCGAGAC CCAGGGCGGC
GTCATGACGA AGATCATCGA GCGGAACACC ACCATCCCGG TGCGCCGCTC GGAGACCTTC
TCCACCGCCG AGGACAACCA GTCCGCCGTG GACGTCGTCG TCCTGCAGGG CGAGCGCGAG
ATGGCGGCCG ACAACCGCGT CCTCGGGCGC TTCCGCCTGG AGAACGTCCG TCCCGGGCCA
CGCGGCGAGC CCAAGGTCGA GGTCACCTTC GACATCGACG CGAACGGCAT CCTCAACGTC
AGCGCGAAGG ACAAGGACAC CGGGGCGGAG CAGGGCATCA CCATCAGCGA GAGTTCGAAC
CTGGACCGCT CCGAGGTCGA CCGCATGGTC TCCGAGGCCG AGCGGCACCG GGCCGAGGAC
CAGAGCCTGC GCCAGGTCGT CGATGCCCGC AACGACCTGG ACACCGTCGC CTACCAGGTC
CAGCGCCGGC TCTCCGAGCT CGGCGACGCC GTCCCGCAGC ACGAGCGAGC CCGCGCCGAA
CTCCTCGTCG GCGAAGCCCG GGACGCGATC AAGCCGGAGG CGCCCGCGCC GCTGGACCGC
CTGCATGAAC TCACCTCCGA GCTGCGGCAG ATCTCCTCGG CTCTGGCCGC CCGCGAAGCC
GGAGGCGCGC CGAGCGGCGA GGCTGCGCAG AGCTCCGCGC CGGGCGGTGG TCCCGAGGGT
TCGACGGGCC CCGACGACGA CGTCATCGAC GCCGAGTTCG ACAAGAGCTG A
|
|---|
| Protein sequence | MAKAVGIDLG TTNSVIAVWE GGEARVIPNT EGSRTTPSVV GFTEDGERLV GQLARRQAIL
NPKGTIYSAK RFIGRHFDEI SAEAKAVAFD VVEGPGGAAR FDVRGKLYAP EEISALVLRK
LAEDASKSLG EKVTEAVITV PAYFNDAQRT ATKDAGKIAG LEVLRIINEP TAAALAYGLD
KKGHETVLVF DLGGGTFDVS ILDVGDGVVE VRSTAGDTHL GGDDFDRRLV DHIADEFQKG
NGIDLREDPQ ALQRLFEAAE KAKTELSSVT QTQINLPFIT ADASGPKHVT QTIRRSTFEE
ITADLVERCL GPVKQAMADA KVTANDIDEV ILVGGSTRIP AVQALVRKLT GGKDPNMTVN
PDEVVALGAA VQAGVLKGEV KDVLLLDVTP LSLGVETQGG VMTKIIERNT TIPVRRSETF
STAEDNQSAV DVVVLQGERE MAADNRVLGR FRLENVRPGP RGEPKVEVTF DIDANGILNV
SAKDKDTGAE QGITISESSN LDRSEVDRMV SEAERHRAED QSLRQVVDAR NDLDTVAYQV
QRRLSELGDA VPQHERARAE LLVGEARDAI KPEAPAPLDR LHELTSELRQ ISSALAAREA
GGAPSGEAAQ SSAPGGGPEG STGPDDDVID AEFDKS
|
|---|
| |