| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6416 |
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| Symbol | |
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| ID | 8337779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7404870 |
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| End bp | 7406978 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644959517 |
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| Product | ABC transporter related |
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| Protein accession | YP_003117111 |
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| Protein GI | 256395547 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00507697 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.224381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTTG AGCTCGAAGA CCGCCGCGAG GCGGGCAGCA TCACCGGCAC GATCGCGACC
CCGGTTCCGA TCCTGGGCGA GGCCGCCCCG GTGGTTCCGA TGGCTCCGGC TCCGGCGGTG
GCTTCGGCTC CAGCTCCAGC AGCGATTCCC GCGGCAGTTC CAGCTTCAAC GCTCACCTCG
GCTTCGACGT CTGCTTCGAC CTCGGCTTCA ACTCCGGTGG CCGCTCCGAC CCCCGCCCTC
CGCCCCCTCG CCACGATCAC CCCCGAATCC CCGGCCGCCC TGTCGACCCG CGGCCTGACC
GTCACCGTCA AGCACCGCGG CGTGGTCAAG ACCCTCCTGG ACGACGTCGG CTTCGACGTC
CCCGAGCAGT CCCTGGTCGC CGTCATCGGA CCCTCCGGCT CCGGCAAGTC GACTCTGCTG
CGCGCCCTGA CCGGCTCGCG CCCCGCCGAC TCCGGCGAGG TCCGCTACGC CGGCCGCGAA
CTGTGCGCCG AGTACTCCCT GCTCCGCCAC CGCATCGGCC TGGTCCCGCA GGACGACGTC
CTGCACGCCC AGCTCACGGT CAAGGCCGCC CTCCGCTACG CCGCCGCCCT CCGCTTCCCG
CAGGGCACCA CCGCCGAGCA GCGCGAACGC CGCATCGACG AGGTCCTGAC CGACCTGCGC
CTGACCGAGT TCGAGGGCAA CAAGGTCGCC ACGCTGTCCG GCGGCCAGCG CAAGCGCGTC
TCCGTCGCCC TGGAGCTGCT GACCAAGCCC ACGGTGCTGT TCCTGGACGA GCCGACCTCC
GGCCTCGACC CGGGCATGGA CCGCGACGTC ATGCGCATGC TGCGCTGTCT GACCGACGAG
GGACGCACCG TTCTGGTCGT CACGCACTCG GTCGCCGAGC TGCAGGCGTG CGACTTGCTG
CTGGTGATGG CGCCCGGCGG CGGGGTGGCG TACTACGGAC CACCGCAGGA GGCGCTGCCG
TTCTTCGAGT GCGAGACCTG GGCAGACGTG TTCCTGGCCT TCTCGTGCCG GCGCGGCTAT
GACTGGGCCG GGGCGTACCG CTCGTCCGTC TATCACGACA CATACAGCGC GACCTCGGCT
GTGGAGTCCT CCGGCGCCAC CACGCTTCCT TCGCCGCGGT CTTCGAGCGA GGACTTTGGT
CCCGGAGCGT CCCGCGAGCG TAACGCTGCG TCAGCAACGG TCCTGCCGAT TCCCGCGACT
GCTGCCGCTG GTCCGCCCAA GACTTCCGCT CCCACCTCCT GCTACTCGAC GCCTCGCGCG
GCGCAGGGCT GGGGTTCCCA GCTCCGCACG CTCATCCGCC GCTACCTCGC GGTCATCGCC
GCCGACCGCG GCCACCTGTG GCTGCTGGCC GCACTCCCGA TGATCATGGG CCTGCTGAGC
CTGGCCATCC CGGCCTCCTC CGGCCTGGCC GCGGCCTCCG GCGGCGACAC GAACACCGAC
GCCCCGACCG TGCTTCTGGT CCTCGCGGTC GGCGCGTGCC TGACCGGCGC CGCCAATGCG
GTCCGTGAGC TGATCAAGGA ACGCGGCATC TACGACCGAG AACGCGCGGC GGGACTGTCG
CGCTCGGCGT ATGTGATGTC CAAGGCGATC GTCCTGGGCG TGATCACCGC GACGCAGACG
ATCGTGCTGT CGGCGATCTG CCTCCTGCCA CGCCGCCTCC CGGCCCACGG TCTGCTGATC
TCCGGCAGCG CCGTCCCGGA GCTGATGCTC GCGGCGGTCC TGCTCGGCGT CACCTCGATG
CTGCTCGGCT TGGTCGTCTC CGCGGTCGTC CGCACCACCG AGAAGACCAT GCCCCTGCTG
GTCCTGATCA CGATCGTCGA GGTCGTGTTC TGCGGCTCCC TGTTCCCCTT GTTCCACAGC
CCGGCGCTGG AGCAGCTCGC CTGGCTCTCC CCGTCGCGCT GGGCGGTCGC CGCCGAAGCC
GCGACGATCA ACCTGCCGAC CATCATGGGC CCACCCCAGG GCCGCACCAC CACCGATCCG
CTCTGGCAGC ACTCGATCCT GCAGTGGGGC GCGGACATCG GGATGCTGGT CGTGCTGGGC
ACGGCGTGCG TGGCACTTGT GCTGCGGCTG CTGCGGCGGC ACGAGTCATC GCTGCTGCGC
GGCTGCTGA
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| Protein sequence | MQVELEDRRE AGSITGTIAT PVPILGEAAP VVPMAPAPAV ASAPAPAAIP AAVPASTLTS
ASTSASTSAS TPVAAPTPAL RPLATITPES PAALSTRGLT VTVKHRGVVK TLLDDVGFDV
PEQSLVAVIG PSGSGKSTLL RALTGSRPAD SGEVRYAGRE LCAEYSLLRH RIGLVPQDDV
LHAQLTVKAA LRYAAALRFP QGTTAEQRER RIDEVLTDLR LTEFEGNKVA TLSGGQRKRV
SVALELLTKP TVLFLDEPTS GLDPGMDRDV MRMLRCLTDE GRTVLVVTHS VAELQACDLL
LVMAPGGGVA YYGPPQEALP FFECETWADV FLAFSCRRGY DWAGAYRSSV YHDTYSATSA
VESSGATTLP SPRSSSEDFG PGASRERNAA SATVLPIPAT AAAGPPKTSA PTSCYSTPRA
AQGWGSQLRT LIRRYLAVIA ADRGHLWLLA ALPMIMGLLS LAIPASSGLA AASGGDTNTD
APTVLLVLAV GACLTGAANA VRELIKERGI YDRERAAGLS RSAYVMSKAI VLGVITATQT
IVLSAICLLP RRLPAHGLLI SGSAVPELML AAVLLGVTSM LLGLVVSAVV RTTEKTMPLL
VLITIVEVVF CGSLFPLFHS PALEQLAWLS PSRWAVAAEA ATINLPTIMG PPQGRTTTDP
LWQHSILQWG ADIGMLVVLG TACVALVLRL LRRHESSLLR GC
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