Gene Caci_6338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6338 
Symbol 
ID8337701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7287878 
End bp7288354 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content71% 
IMG OID644959439 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003117033 
Protein GI256395469 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00160711 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGAAT TCCTGGACCT GCACAGCAAG ACCTCCAAGG CGCTCCGGGG CGTGGTCGAG 
ACGGCGATGC GCCGCCACGG GCTGTACGCG GGCCAGGACC TCGTCCTGGC GCTGCTCTGG
GAGCGTGACG GCCGCACCCC CGGCGAACTC GCGACCGCGC TGCACGTGAC CACACCGACC
GTGGTCAAAG CCGCCAACCG CATGACCGCC GCCGGTCTGC TCACCCGCCG CCGCGACGAG
CGCGACAACC GCCTCGTGGG CCTGTGGCTC ACCGACGCCG GCCGCGCCCT GCAGGAGCCG
ATCGAGGCCG AGCGGCGGGA CATCGAGGAG AAAGTCACCG CGGGCCTCAC CGAGGCCGAA
CGGGACCAGT TGATCAGTGC CCTGACTCGG GTTCAGCGTT CTGCCGCCGA TCTGCTGCGT
CCGCCTGTCG CCGACGCCGA CGAGGCCGCC GAAGGCGACG AATCCGGCCT CGATTAG
 
Protein sequence
MPEFLDLHSK TSKALRGVVE TAMRRHGLYA GQDLVLALLW ERDGRTPGEL ATALHVTTPT 
VVKAANRMTA AGLLTRRRDE RDNRLVGLWL TDAGRALQEP IEAERRDIEE KVTAGLTEAE
RDQLISALTR VQRSAADLLR PPVADADEAA EGDESGLD