| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6330 |
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| Symbol | |
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| ID | 8337693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7280240 |
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| End bp | 7281553 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644959431 |
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| Product | putative transcriptional regulator, GntR family |
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| Protein accession | YP_003117025 |
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| Protein GI | 256395461 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00057428 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00168096 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCACCA CCACCCCCAC CCCCGCGCCG ATCGACGTGT CCCGGGTGAC TCCGACCCCG
AACGCACCGG CACTCGCGCC GATTGACCTG GCACCACCGA TCCCCACCGC GTCAGCACCC
GCACCCGCGC TCGCACCGGT CGACCTGCCG CGACCGATCC CCACCGCGCC AGCACCCATC
GATCTTTCCC AACCGGTCTT CGGCGCCGCA GCCAGCTTCC CGTCGTCTCT CGACCCAGCC
CGCGCTCTGG CCGAAGCGGC ACCGGCCCTC GCCGCCCACC TGTCCGACTT CCACCGCCAC
CCCGCCGGCC TGCCAGATCT GCGCGCCGCG GTCGCCGAGC GGTACACCCG CCGCGGTGTG
CCGACCACGC CAGACCACAT CGTCGTCACC AGCAGTCCTC AAGCCGCGCT GGCCCTCGCA
ATCGGCCTGT TCTGCGCACC CGAGGACCGC GTTCTGGTCG AGAACCCGAC ACACCCCGAC
ACGCTCGCCG TGCTCCGCTC CTGCGCAGTC CGACCGGTCC CCATCCCACT CGGCGGCAAC
GGCATCACCC CAGCAGACCT CCCCGGCAGG TTCGTCCACA CCGCCGCGCG CCTGGCCCAC
TTCAGCGCCG GCTACCAGAA CCCGACCGGC CACCTGCCCT CCGCTGAGGT CCGACTGGCC
GCAGCCGAGT CGGCACGTCG CTCGGGAACC TGGCTCATCG CCGACGAGAC CGCGATCGAG
CCAGTCCTCG ACGGCGTCGC CCCCGAGCCC TTCACCCTCG GCGTCCCACG AGCCGCGGCC
GAGCGCATCG TCACCATCGG CGCACCCTCC CAGACCCACG GCCTCGCCCT ACGCGTCGGC
TGGCTCCGCG CGACACCCCG CACCGCCGCC GCCCTCGCAC GCCACCAAGC CGACGCCGGC
CTCGGCGCAT CAGCACTCGA CCAAATACTC ACCACCAATC TGCTGCACCA AGCCGACGCC
GACCTCCCCG CACACCGCGC ACAGCTACGC GAACGGCGCG CAGCCCTGGA ATCCGCCCTG
ACCCGCCTCG CCCCCGAATG GTCGTGGCGC CACCCCGCCG GCGGCCTCAC GCTCTGGGTA
GACCTCGGCC GCCCCGCAGC CGCAGCACTG ACCACTCACG CCGCCAACGC CGGAGTCCAC
ATCACCCCCG GATCGCGCTT CACCCTCGAC CCAGGGGCCC ACGACCACCA CATCCCGCTC
CCATTCACAC TCCCCGCGCC AGCCCTCACC GAAGCCGCAT GCCGCCTAGC CACCGCCTGG
CACCAGACCC TCTCCACACC CCGGAGCCCC GACCGCCACA TGTGGACGGT CTGA
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| Protein sequence | MTTTTPTPAP IDVSRVTPTP NAPALAPIDL APPIPTASAP APALAPVDLP RPIPTAPAPI
DLSQPVFGAA ASFPSSLDPA RALAEAAPAL AAHLSDFHRH PAGLPDLRAA VAERYTRRGV
PTTPDHIVVT SSPQAALALA IGLFCAPEDR VLVENPTHPD TLAVLRSCAV RPVPIPLGGN
GITPADLPGR FVHTAARLAH FSAGYQNPTG HLPSAEVRLA AAESARRSGT WLIADETAIE
PVLDGVAPEP FTLGVPRAAA ERIVTIGAPS QTHGLALRVG WLRATPRTAA ALARHQADAG
LGASALDQIL TTNLLHQADA DLPAHRAQLR ERRAALESAL TRLAPEWSWR HPAGGLTLWV
DLGRPAAAAL TTHAANAGVH ITPGSRFTLD PGAHDHHIPL PFTLPAPALT EAACRLATAW
HQTLSTPRSP DRHMWTV
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