Gene Caci_6266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6266 
Symbol 
ID8337629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7207623 
End bp7207976 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content66% 
IMG OID644959367 
Productprotein of unknown function DUF419 
Protein accessionYP_003116961 
Protein GI256395397 
COG category[S] Function unknown 
COG ID[COG2315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.312319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGG AGGAACTGAA AGCGGCCTGC CTTGATCACC ACGGAGCAGT GGAGGACTTC 
CCCTTCGCCC CCGAAGTATC GGTGTTCAAG GTGGCCGGCA AGGTCTTCGC CATCACCCGC
CTCGACGAGC ACCCCCTGGC CGTGAGCCTC AAGAGCGACC CGGACCTCGC CGCGAACCTC
CGCGCGGCAC ACGCTGCGAT CCGTCCCGGC TACCACCTGA ACAAGCGGCA CTGGAACACG
GTCACCATCG ACGGCTCCCT CGGCGAGGAG ATGGTGCTGG ACATGATCGA GGATTCCTAC
GACTTGGTAG TGAAGTCGCT GACGCGGGCT CAGCGGGCTG CGCTCGGCGG CTGA
 
Protein sequence
MTPEELKAAC LDHHGAVEDF PFAPEVSVFK VAGKVFAITR LDEHPLAVSL KSDPDLAANL 
RAAHAAIRPG YHLNKRHWNT VTIDGSLGEE MVLDMIEDSY DLVVKSLTRA QRAALGG