Gene Caci_6256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6256 
Symbol 
ID8337619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7195448 
End bp7195825 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content66% 
IMG OID644959357 
Productmembrane protein of unknown function 
Protein accessionYP_003116951 
Protein GI256395387 
COG category[S] Function unknown 
COG ID[COG1950] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.222894 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGC GGCTTCTCAC TGCCTGGATC ATCCTGGCAC TGGCGTTCGT CCTGGCCGCG 
TGGGTCGCAC CGGGCATGAG CATCCACGGC GGACCGGTCT CCTGGCTGTT GCTCGCGGCG
GCCTTCGCCG CGCTGAACCT GGTCCTCGGC ACCGTTCTGC GGCTGGTCAC AGCGCCGCTG
ATGCTGCTGA CGCTGGGCTT GTTCGGCATC ATCATCAACG CCGTGCTGAT CCGGCTGGTC
GCGGCCTGGA CCGACCGGCT CCAGCTGGAC GGGTTCGGAT CGGCCGTCTG GGGCGCCGTG
TTCGTCATGA TCTTCACCTG GCTGCTCCGG CTGACACCGC TCGGCAGGCC CAGACACACC
CACAAGAAAA AGCACTGA
 
Protein sequence
MLKRLLTAWI ILALAFVLAA WVAPGMSIHG GPVSWLLLAA AFAALNLVLG TVLRLVTAPL 
MLLTLGLFGI IINAVLIRLV AAWTDRLQLD GFGSAVWGAV FVMIFTWLLR LTPLGRPRHT
HKKKH