Gene Caci_6245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6245 
Symbol 
ID8337608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7182381 
End bp7183712 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content66% 
IMG OID644959346 
Productputative ATPase 
Protein accessionYP_003116940 
Protein GI256395376 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0162013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.387295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTCA ATCCACCGCC GGGTTGGCCG ACTCCGCCGG AAGGCTGGAC GCCGCCAGCC 
GGGTGGGTAC CGGACGCTTC GTGGCCCGCC CCGCCTGAGG GCTGGGAACT CTTTATCCAT
GACGGAGATG ACGCCGGAGC CGAGGCTGAG GCGCAGCCGG AGGCCGTCGC GGCACCAGCG
CCTGTGTCAG TGGCTCCAGC CGGGACAGAA GTGCTGCTGG CGCGGATCGC GTCGCTGGAG
GCGGCACTCG CCGCGGCCCA AGGCGGAGAG GCGGCTTCTG ATGTGATCGA GCTGTCCGAT
CAGCGGATCC TGCAAGACGT CGGCATCTAC CGCTACCACC ATCCCCTTGA GGACGCGGCG
GCGTACAAGG AGCGCCTTCA GGAGCTGGAT GGCCAGATCG ATGCGGTCAT CAAGGCGGGG
CAGGCGATCC TGGCATCTGA GCTGTTCACC TTCAGCGGGT CTTTGGCGAA GGGGCGCAAG
CTTGTCGCTG ACCTGTCGAA GCTGATGCTG CGGGCGTACA ACGCTGAGGC GGACAACTGC
GTGCGCTCGC TTCGGTCGGG CAACGTGCAC ACGGCGAAGA GGCGCCTTGA GTCCGCGATG
GCTGCGATCG AGAGGCTCGG ACGCATCATG GAGATGCGGA TCAGCCCGGC CTATCACGCG
CTGCGCGTCG CCGAGCTGGA GCTGACCGCC GACTTTCAGA TGAAGGCTCA GGAAGAGCGG
CAGAAGGCGC GCGAGGAACG CGAGCTTCTT CGCGAGCAGC GCCGTGTCGA GGCTGAGCTT
GCTGCTGAGC GCGAGCGCCT GGAGAAGGAG CGCAGCCACT ACGTCACGGT GCTGGAGTCG
TTGCGGGCCA AGGGTGATGA GAGTGCGGCT GCCGAGCTCG CCGGCCGTTT GTCCGACATC
GAGCAGGCCA TCGCGACGAA CGACTACCGC ATCGCGAACA TCCGCGCCGG CTATGTGTAC
GTCATCTCCA ACATCGGCGC GTTCGGGCCG GGCGTCGTGA AGATCGGCAT GACCAGACGC
CTGGAGCCGA TGGACCGTGT CCGAGAACTT GGGGACGCCT CCGTGCCGTT CCGATACGAC
GTGCACGCGC TGTTCTTCTC CGACGACGCC ATCGCACTCG AGCACGAACT CCACAAGTCG
TTCGCCCACC GCCGCGTGAA CTACGTCAAC GAACGCCGCG AGTTCTTCTT CGCCACCCCG
GCCGAGGTCC GCGTCATTCT GGAGCAGAAA GTCGGCGGCC TGCTGGAATT CACCGAGACC
CCCGCCGCCC TGGAGTACTT CCAGTCGAGA GGTCGCTGGC CCGCCGTCGA ACCGGATGTA
CGGCGCGAGT GA
 
Protein sequence
MRFNPPPGWP TPPEGWTPPA GWVPDASWPA PPEGWELFIH DGDDAGAEAE AQPEAVAAPA 
PVSVAPAGTE VLLARIASLE AALAAAQGGE AASDVIELSD QRILQDVGIY RYHHPLEDAA
AYKERLQELD GQIDAVIKAG QAILASELFT FSGSLAKGRK LVADLSKLML RAYNAEADNC
VRSLRSGNVH TAKRRLESAM AAIERLGRIM EMRISPAYHA LRVAELELTA DFQMKAQEER
QKAREERELL REQRRVEAEL AAERERLEKE RSHYVTVLES LRAKGDESAA AELAGRLSDI
EQAIATNDYR IANIRAGYVY VISNIGAFGP GVVKIGMTRR LEPMDRVREL GDASVPFRYD
VHALFFSDDA IALEHELHKS FAHRRVNYVN ERREFFFATP AEVRVILEQK VGGLLEFTET
PAALEYFQSR GRWPAVEPDV RRE