Gene Caci_6232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6232 
Symbol 
ID8337595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7170476 
End bp7171297 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content72% 
IMG OID644959333 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003116927 
Protein GI256395363 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.381441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCT CGACCTCGAC TCCCGCCGCC CGCACCGTCA CTATCCCGAC CGGCATGGGC 
ATCACGTTCA GCGAGTTCGG CACCAACTCC GACGGCACCG CCGTCCTCCT CCTGCGCGGC
GGCGCCGGCC CGCGCACCAT GCTCGGCCTG GCCGGCGCCC TCGCCGAGCA CGCCTACGGC
ATCGTCCCGA CGCACCCCGG CTTCGACGGC ACGCCGCGCC CCGACCGCTT CGACACCGTC
GCCGACCTCG CCGACGCCTA CCTGGACCTG CTCGACGAGC TGGACCTCAC CGGCGTCATG
GTGATCGGCA GCTCGCTCGG CGGCTGGATC GGCGCCGAGA TGGCGCTGCG CGACAACCGC
GGCCGGCTGG GCGCGCTGGT GCTGGTCAAC GCCGTCGGCA TCAAGGCCGC CGGGGACGAG
CAGGTCGTCG ACGTCCGCAC CATGGCGCCG CCGCAGCTCA GCCAGCTGTC GTTCGCCAAC
GCCGAGTTCC GCCCCGACTT CGCCTCGTTC ACCGACGAGC AGAAGGCGGT GGCCGCCGCC
AACCAGCAGA CGATGGCGGT CTACACCGGC CAGGAGTACA TGCACGACTC CAAGCTGCGC
CGCCGCCTGC ACCGCATCAC CATCCCGGCG CTGGTCATCT GGGGCGAGCA GGACGGCATA
GCGCCGCTGG GCTACGGCCG CGACTTCGCC GCCGCGCTCG GCAACGGGCA CTTCGCCCCG
ATCGCCGACG CCGGGCACTT CCCGCAGATC GAGCAGATCG GCGCGACGCT CGGCGCCCTC
GGGGAGTTCG TCGACACCGT GGTCAAGCCC GACGAGGCGT GA
 
Protein sequence
MSTSTSTPAA RTVTIPTGMG ITFSEFGTNS DGTAVLLLRG GAGPRTMLGL AGALAEHAYG 
IVPTHPGFDG TPRPDRFDTV ADLADAYLDL LDELDLTGVM VIGSSLGGWI GAEMALRDNR
GRLGALVLVN AVGIKAAGDE QVVDVRTMAP PQLSQLSFAN AEFRPDFASF TDEQKAVAAA
NQQTMAVYTG QEYMHDSKLR RRLHRITIPA LVIWGEQDGI APLGYGRDFA AALGNGHFAP
IADAGHFPQI EQIGATLGAL GEFVDTVVKP DEA