Gene Caci_6231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6231 
Symbol 
ID8337594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7169333 
End bp7170334 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content71% 
IMG OID644959332 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_003116926 
Protein GI256395362 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.512289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCT CGCCGAGCAC CATGCGTGCC GTCCGACTCT CCGGTCCCGG TCCCGTGGAC 
AATCTCGAGC TCACCACTGT CCCGCTCCCG CCCGAGAAGG ACGGCTGGGT CCGCATCCGC
GTCGAGGCGT TCGGCCTCAA CCGCTCCGAG CTGAAGCTCC GGCTCGGCGT GAGCGTCGGC
GTCAGCTTCC CCCGCGTGCC GGGCATCGAG GCGGCGGGCA CCATCGACGC GGCACCGGCC
GACAGCGGAC TGGTCCGCGG CCAGAAGGTC GTCGCGATGA TGGGGGACAT GGGACGTACC
TACGACGGCG GATACGCCGA GTACACCTCG GTTCCGCTGT CCCAGGTCAT CCCCATCGAC
ACCGATCTGC CATGGGAAGT GCTCGGCGCG CTGCCGGAGA TGGTGCAGAC CGCCTACGGC
TCGCTCACCG TCGGTCTGGA CATCCAGCCC GGGCAGACCG TGCTGATCCG CGGCGGGACG
TCCTCGGTCG GCCTGGCCGC CGCAGCGCTC GCCGGCTGGC GCGGCTGCAC GGTCCTGTCC
ACCACCCGGA AGGCCGATCG GCTCGCTCTG CTGAAGGAAC GCGGCGTTGA CCATCCGCTG
CTGGACGACG GCGACGTCGC CGCCGCCGTG CGCGAGCTCT ACCCCGACGG CGTCGACGCC
GCCCTCGACC TGGTCGGCAC GCCGACCCTG CCGGACACGC TGCGCGCGGT CCGGGTGCAC
GGCACGGCGT GCTTCGGCGG CAGCCTGTCC AACCAATACA GCGTGCGGGA CTTCTCCCCG
AACGAGTACC TGCCCCGGGG CGTGCGGCTC GCGGGCTACT TCGGCGACGC CAGCGACCTG
CCGCAGGACG TGTTCCAGGA GATCCTGGAC GCGGTCGCGG CCGGGCAGCT CACCTTCCCG
GTGGACCGCG TCTACGACGG TTTGGAGCAG GTACGCCAGG CTCACGACGA CATGGAGCAC
GACCGCGCCA CCGGCAAGCT CGTGGTGCGC GTCCGGCACT GA
 
Protein sequence
MTSSPSTMRA VRLSGPGPVD NLELTTVPLP PEKDGWVRIR VEAFGLNRSE LKLRLGVSVG 
VSFPRVPGIE AAGTIDAAPA DSGLVRGQKV VAMMGDMGRT YDGGYAEYTS VPLSQVIPID
TDLPWEVLGA LPEMVQTAYG SLTVGLDIQP GQTVLIRGGT SSVGLAAAAL AGWRGCTVLS
TTRKADRLAL LKERGVDHPL LDDGDVAAAV RELYPDGVDA ALDLVGTPTL PDTLRAVRVH
GTACFGGSLS NQYSVRDFSP NEYLPRGVRL AGYFGDASDL PQDVFQEILD AVAAGQLTFP
VDRVYDGLEQ VRQAHDDMEH DRATGKLVVR VRH