Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6228 |
Symbol | |
ID | 8337591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7167081 |
End bp | 7167665 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644959329 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003116923 |
Protein GI | 256395359 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.301912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.923303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCAAGG TCTCCGAAGA ACACGCCGCC GCCCGGCGGG AGCAGATCCT GTCCGCCGCC CAGCGCTGCT TCGCCCGCAA GGGCTTCCAC GCCACCTCGA TGAACGACGT CTTCGCCGAG GCCGGCCTGT CCGCCGGCGC CGTCTACAGC TACTTCAAGA GCAAGGACGA GATCATCGTC GCGATGGCCG AGCGCGCCGT CCGCATGATC GTCCCCTTCC TGGACGCGGT GCTCGCCGAG GAACCGGCGC CGCCGCTCGA GGACGTGATG CGCCGCTACA CGATCCAGCT CCAGGAGCTC GCTGCCGGTC CCGGTTCGGT GGCGCCGCAG GTGTGGGCCG AAGCCACCCA CAACCCGGCG CTGGTCCCGG TCGTCACCGC GAACCTGCGG CGGATGCGCG ACTTCTGGAC CGGGATCGCC CGGCACGAGC AAGCCGCCGG CCGCCTGGCT CAGGATGCTG ATACCGAAGC GGTCGGCACG GTGTTGTTCA CGATGACCCC GGGCTACATG TTCGGCCATC TCCTGCTCGG CGACATCAGC CCTGAGACGG TCGAACGCGG GCTCCGCGAC TTGCGGCGAT CGTAG
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Protein sequence | MPKVSEEHAA ARREQILSAA QRCFARKGFH ATSMNDVFAE AGLSAGAVYS YFKSKDEIIV AMAERAVRMI VPFLDAVLAE EPAPPLEDVM RRYTIQLQEL AAGPGSVAPQ VWAEATHNPA LVPVVTANLR RMRDFWTGIA RHEQAAGRLA QDADTEAVGT VLFTMTPGYM FGHLLLGDIS PETVERGLRD LRRS
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