| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6227 |
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| Symbol | |
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| ID | 8337590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7165950 |
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| End bp | 7166957 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644959328 |
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| Product | transcriptional regulator, TrmB |
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| Protein accession | YP_003116922 |
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| Protein GI | 256395358 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0764257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCT CGGCCCGTAT CGACGTGGCC ACACTGCTGG GACTCGGGCT GGAGGAACGG
CTCGCTCAAC TATGGATCGC AATGGCGTCC GCGCCCGGCG CCGGCGTCGA AGAGCTCGCC
GATGTCCTGG GCATCAGCGA GTCCCAGGCG CGCGTGGCGC TGGACGCCCT GGCCGACCGC
GCCCTGGTCC GCGTCTCTCA GCAGACCCCT GGTCTGCTCG TGCCGGTGAC CGCCGAGGCC
GCGCTCAGGC AGTTGCTGCG CCGCCAGGAA GAGGAGTTGG CCGAGCAGCA GCGCCGGATC
GAGGAGCAGC GGGACCAGAT CACGAAGGCC GTCTCGGCAT CAGCCCGGGA CAGCGACGAC
GGCCGCGTCG AGCACATCGT CGGCGCCGAC GCCATCCACG CCCGCTTCGA GCAGCTCGCC
TACCGCACCG AGACCAGCAT CGACTCGCTG CTGCCGGTGA CCGGCCTGCC CGCCCAGATG
CTCTCCGACG CCAAGCCGCT GGACGTCGAT CTGCTCCAGC GCGGCGTGGC CATGCGCTCG
CTCTACCTCG AGGCCATCCG CAACGACGCG CCCCTCATGG CCTACGCCCG CGACATGCAG
GCCGCCGGCG CCGACGTCCG CACCAGCCCC ACGCTGCCGC AGCGGCTGTT CATCAGCGAC
CGCTGCCTCG CCGTCGTCCC GGTGGACCCC TCGACCCGCG CCCACGGAGT GCTGCTGGTC
CGGACGCCTG GAGTCGTCGC CTCACTGCTC GAACTCTTCG AAACCGTGTG GCACAACGCC
GCCCCGCTCG ACGTCGGCAA CCCCATCGAC ACCGCCACCG GCCTGTCCGA CACCGAACGC
ATCCTGCTCA CCATGCTCGC CGACGGCGCC ACCGACGAGA GCGCCGCCAA GCGGCTCGGG
GTCTCGCTGC GCACGGTCCG GCGCATCATG GCGGACCTCA TGCGGCGCCT GGACGCCGGA
TCGCGGTTCG AGGCGGGGAT CAAGGCTGCT CGGCGGGGAT GGCTGTAA
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| Protein sequence | MPASARIDVA TLLGLGLEER LAQLWIAMAS APGAGVEELA DVLGISESQA RVALDALADR
ALVRVSQQTP GLLVPVTAEA ALRQLLRRQE EELAEQQRRI EEQRDQITKA VSASARDSDD
GRVEHIVGAD AIHARFEQLA YRTETSIDSL LPVTGLPAQM LSDAKPLDVD LLQRGVAMRS
LYLEAIRNDA PLMAYARDMQ AAGADVRTSP TLPQRLFISD RCLAVVPVDP STRAHGVLLV
RTPGVVASLL ELFETVWHNA APLDVGNPID TATGLSDTER ILLTMLADGA TDESAAKRLG
VSLRTVRRIM ADLMRRLDAG SRFEAGIKAA RRGWL
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