Gene Caci_6201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6201 
Symbol 
ID8337564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7138538 
End bp7139692 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content72% 
IMG OID644959302 
Producthypothetical protein 
Protein accessionYP_003116896 
Protein GI256395332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.196409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACG TGCTGCGGCA GGTGCCGCTC ATCGACGGTC CGGTCGAGAT CCGCGGAGCC 
CTGGAAGTCG TCACGACCGA GGCCGGTGTG CTGGCGCGGC GGCTGCCGGA GTGGACGATC
GCGCAGTCCG ACGCCTCGAT GGAGCGGCAG GCCACGGCCG GGTCCGGGGT GCGGCTGGCG
TTCCGGACGG CTGCCACGGC GCTCGAGCTG GACGTGCTGA CCACCGTGCC GATGATGGCC
GAGAACGAGC CGCACCCGGA CGACGCGGGA GCTTTCGAGA TCACGTGCGA CGGCGCCGCT
GTGGGCGACC CGCAGCGCGC CCCGGTCGGC AACGTGCTGC TGATGGACCC GACGATGACC
CAGGTCGGCT ACGTCGCCGG GCAGACGGCG ACGGTGCGGT TCGAGGCGCT GCCGGCCGGC
GTGAAGGACG TCGAGATCTG GTTGCCGCAC TGGGTGAAGA CCGAACTGGT GGCGCTGCGC
GCGGACGCCG ACGTCGAGCC GCCCGCGCCG ACCGGCCGCC GGGTGTGGCT GCACCATGGA
AGCTCGATCA GCCAGTGCAA CGAGGCGGAC TCGCCGTTGG GCGTGTGGCC GGTGATCGCG
GCGCGGGCGG CCGGGGTGGA CCCGGTGAAC GTGGGACTGG CAGGGAACTG TTTCCTGGAC
CCGTTCGTGG CGCGCTCGAT CCGCGATGCC GCAGCGGACG TGATCAGCCT GAAGCTGGGC
ATCAACCTCA CCGCCAAGGC GGCGTACCGG GTGCGCACGT TCGCCCCGAC CGTGCACGGC
TTCCTCGACA CGGTGCGCGA GGGCCATCCG GACACGCCGA TCCTCGTCGT CTCGCCGATC
GCCTGCCCGG CGCTGGAGGC GCGGCCCGGA CCGACGGTGT GGCGCGAGGA CGTGCTGTAC
GCGACCGGCG ATCCGGCGGC GGCGAGCGGG GAGCTGACGC TGCAGGTGGT GCGGCGGGAG
CTGCGGCGGA TCGTGACGGA GCGGGCGAAG CAGGACCCGA ACATCTATTA CTTGGACGGC
TTGCGGTTGA TGGGACTGGA CGAGGCGGAC GAGTACTTGG GGGAGGGGCT GCATCCGACG
CCCGCCGGGT ATCGGGTGAT CGGGGAGCGG TTCGCTCGGA TCGTGTTCGG GGAGGGCGGG
GTGTTCGCGG GGTAG
 
Protein sequence
MTDVLRQVPL IDGPVEIRGA LEVVTTEAGV LARRLPEWTI AQSDASMERQ ATAGSGVRLA 
FRTAATALEL DVLTTVPMMA ENEPHPDDAG AFEITCDGAA VGDPQRAPVG NVLLMDPTMT
QVGYVAGQTA TVRFEALPAG VKDVEIWLPH WVKTELVALR ADADVEPPAP TGRRVWLHHG
SSISQCNEAD SPLGVWPVIA ARAAGVDPVN VGLAGNCFLD PFVARSIRDA AADVISLKLG
INLTAKAAYR VRTFAPTVHG FLDTVREGHP DTPILVVSPI ACPALEARPG PTVWREDVLY
ATGDPAAASG ELTLQVVRRE LRRIVTERAK QDPNIYYLDG LRLMGLDEAD EYLGEGLHPT
PAGYRVIGER FARIVFGEGG VFAG