Gene Caci_6181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6181 
Symbol 
ID8337544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand- 
Start bp7113727 
End bp7114335 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content72% 
IMG OID644959282 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003116876 
Protein GI256395312 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.685616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA GCCGGACGAG CGCCGCCTCG CGGCGCATCA CCTACACCCC GGACTCCCTG 
TTGGAAGTCG CGGTCGCCGT GTTCAACGAG CGCGGATACG ACGGCACCAG CATGGAGGAC 
CTGGCGCGGG CGGCGGGGAT CACGAAATCG TCGATCTACC ACCACGTCAA GGGCAAGGAA 
GAGCTGCTGA CGCGCGGCGT CAACCGGGCC CTGGACGCGC TGAACGCCTC GCTGGACACC 
CTGGAGGCGC TGCCGGACGC CGGCGAGCTG GACCGGGTGG AGCAGGCGGT GTTCCGCGCG 
GTGCAGATCC TCGTCGACGA GCTGCCGTAC GTCACGCTGC TGCTGCGCGT GCGCGGCAAC 
ACCGAGACCG AGCGGGCCGC GCAGGCCCGG CGGCGCGAGA TCGACCAGCG GCTGGCAGGG 
TTCGTCGAGC GCGCGGCGGC GGCCGGGGCG CTGCGGACCG ATCTCGATCC GCGGCTGGCC 
TCGCGGCTGG TGTTCGGGAT GGTGAACTCC GTCGTGGAGT GGTACCGGCC GGGTCCGGCG 
CGCTGGTCCG CCGACGATGT CGCCTCCGCG GTGACCCACC TGGTGTTCGA CGGCTTGCGG 
CGCCGCTGA
 
Protein sequence
MNTSRTSAAS RRITYTPDSL LEVAVAVFNE RGYDGTSMED LARAAGITKS SIYHHVKGKE 
ELLTRGVNRA LDALNASLDT LEALPDAGEL DRVEQAVFRA VQILVDELPY VTLLLRVRGN 
TETERAAQAR RREIDQRLAG FVERAAAAGA LRTDLDPRLA SRLVFGMVNS VVEWYRPGPA 
RWSADDVASA VTHLVFDGLR RR