Gene Caci_6124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6124 
Symbol 
ID8337487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7047066 
End bp7047497 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content68% 
IMG OID644959225 
Producthypothetical protein 
Protein accessionYP_003116819 
Protein GI256395255 
COG category[R] General function prediction only 
COG ID[COG3631] Ketosteroid isomerase-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.532323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00265373 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGAGC ACGTCCGCAC CAGCCGCGAA ACCGTCGAAC TGCTCCTGCG CACCGTCGTC 
GAGGGCAGCC GCGACGAGCT CGCCGACCTG TACGCCGAAG ACGTCGTCAT CACGAACCCG
TTCATCGCCG AGGAGCACAG CGCATACCGC GAGACCCGCG GCAACGCCGC CCTGCGCGCC
CGGACGAAGC CCTTCGCGCA GTTCCTGCAG TACTCGCAGG TCAAGGACGT CACCCTCCAC
GAGACCACCG ACCCGCAGGT GACGGTCGTG GAGTTCACGG TCGTCGGCAC GCTCCTGCCC
ACCGGCGAGG GGTTCGAGAT GCCCTATGTC AACGTGATCC GGGTCGTCGA CGGCCTGATC
GCCGAATCCC GCGACTACGG CGACAGCGTG CGCGCCGCCA AGCTGCTGGA GTCGATCCAG
TCCGCCGCCT GA
 
Protein sequence
MSEHVRTSRE TVELLLRTVV EGSRDELADL YAEDVVITNP FIAEEHSAYR ETRGNAALRA 
RTKPFAQFLQ YSQVKDVTLH ETTDPQVTVV EFTVVGTLLP TGEGFEMPYV NVIRVVDGLI
AESRDYGDSV RAAKLLESIQ SAA