| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6107 |
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| Symbol | |
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| ID | 8337470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7025582 |
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| End bp | 7027021 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644959209 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_003116803 |
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| Protein GI | 256395239 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0577831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.070905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGATA CACAGACCAA TCTGGCCTGG GAGACCCTCC TGGACCTGTC AACGACACGC
CCCGGTCCAC TGCACCACCA GCTCGCCGAG GCCATCCGCA CCGCCATCCG CGGCGGACGC
CTGCCGCTGG GCTCCGCACT CCCCCCGAGC CGCGTCCTGG CCACCGACCT GGGCGTCTCC
CGCTGGACCG TCACCGAGGC CTACGGACAA CTGGCGACCG AGGGCTTCCT CGCCGGCAAG
ACCGGATCGG CGACCCGCGT CAGCTGGTCC CCGGAACCCG ACGAACGCCG CGCGGTCGTC
CACAGCCACC CGGGCCACGC CGACCCCCGC CGCCACCTCC CGGTCCGCTA CGACTTCTCG
CAATGCACCC CCGACTTCCG CGCCTTCCCC CGCCGCAAGT GGGTCGAGGC GATCCGCACC
GCGGCCGAGA CCGCGCCGTT CGACCGCCTC GGCTACGCGC AGCCCGGCGG CGAGCCCCGG
CTGCGCGGCA TCCTCGCCGA CCACCTGAAC CGCCGCCGCG GCACGAACAT CGACCCCGCG
TTGATGACGG TGTTCACCGG AGCCAAGGCG GCGATGGGAG CGCTGGCGCG GGCGCTGTAC
GCCGAGGGCC ACCGGCTCCT GGCGATCGAG GACCCTGGTT CGAACGGGAT GTGGGAACCC
GCGCGCGCCG CAGGGCTGGA GCTGGTGCCG CTGCCGGTGG ACGAGCGCGG GATCGTCGCC
GAGGCGCTGG CGGAGCATCC GGGCGTACGC GCGGTCTGCA TCGGGCCCGC GCACCAGGTG
GTGAACGGCG CGGAGCTGGC ACCGGAGCGC CGCAGCTGGC TGCTGGAGTG GGCATCGCGG
GTCGACGGCC TGGTGATCGA GGACGACTAC GACTCGGAGT TCTCCTACGA CAGACCGGCG
CTCCCGGCAA TGCAGGGCAC AGACCCCCGC CGGGTAGCCC TGATCGGCTC GATGAGCCGC
ACGATGACAC CCACGGTGAA CGTCGGCTGG GCCGTGGTCC CCGGCCGCTG GCTCACCGCA
CTCCGCCCCG AACCCTGGAC AGCCCCGACC GCCCCGGCCC TGAACCAACT GGCGCTGGCA
CACTTCATCG AATCCGGCTC CTACGACCGC CACCTCCGCA CGAGCCGCCA ACGCTTCCGA
ACCCGACGCG ACGCCCTCGT CGCAGCACTG GAGCAAGCAC TGCCCGGCGC ACGCGTCAGC
GGACAGCAGG CCGGACTGCA CATGCTGCTG GAGCTGCCGC CCGGCGCTTC GGCGACACGG
GTGATGGCGG CAGCGCTCAG GCACGAGATC GAACTGTGCG ACCTGAACCT GCTCCGCATG
GCCGGCGACC CCGACACCAC CCGGCTGATG GTCGGCTACG GAAACCTGGC CGACGCGCAG
GTGACCGCGG GGGTCGCGGC GCTGGTCGAA CTCATACGCG AGGCGGGTGG CGAGGGCTGA
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| Protein sequence | MADTQTNLAW ETLLDLSTTR PGPLHHQLAE AIRTAIRGGR LPLGSALPPS RVLATDLGVS
RWTVTEAYGQ LATEGFLAGK TGSATRVSWS PEPDERRAVV HSHPGHADPR RHLPVRYDFS
QCTPDFRAFP RRKWVEAIRT AAETAPFDRL GYAQPGGEPR LRGILADHLN RRRGTNIDPA
LMTVFTGAKA AMGALARALY AEGHRLLAIE DPGSNGMWEP ARAAGLELVP LPVDERGIVA
EALAEHPGVR AVCIGPAHQV VNGAELAPER RSWLLEWASR VDGLVIEDDY DSEFSYDRPA
LPAMQGTDPR RVALIGSMSR TMTPTVNVGW AVVPGRWLTA LRPEPWTAPT APALNQLALA
HFIESGSYDR HLRTSRQRFR TRRDALVAAL EQALPGARVS GQQAGLHMLL ELPPGASATR
VMAAALRHEI ELCDLNLLRM AGDPDTTRLM VGYGNLADAQ VTAGVAALVE LIREAGGEG
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