Gene Caci_6053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6053 
Symbol 
ID8337416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6975403 
End bp6976431 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content70% 
IMG OID644959157 
Product6-phosphofructokinase 
Protein accessionYP_003116751 
Protein GI256395187 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0205] 6-phosphofructokinase 
TIGRFAM ID[TIGR02483] phosphofructokinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.554738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG GAGTGCTGAC CGGCGGCGGG GACTGCCCGG GACTGAACGC GGTGATCCGC 
GCCTCGGTCC GCAAGGGAGT GCAGTTCTAC GGCTTTGAGT TCGTCGGTTT TCGGGACGGC
TGGAAGGGCC CCCTGGACCG GATGACCAAG CCGTTGGACG TCGAGGCGGT GCGCGGCATC
CTGCCCCGCG GCGGCACCAT CCTCGGATCC TCGCGCACCA ATCCGTTGAA GGTGGAGGGC
GGCGTCGAGC GGATCAAGGA GAACCTGGCA GCCGAGGGCG TGGACGCCCT GATCGCCATC
GGCGGCGAGG ACACCCTCGG CGTCGCGACC GTGCTCGGCG ACGAGTACGG CGTCAACGTC
GTCGGCGTGC CCAAGACCAT CGACAACGAC CTCAACGCCA CCGACTACAC CTTCGGCTTC
GACACCGCGG TCCACGTCGC CACCGAGGCG ATCGACCGTC TGCACACCAC CGCCGAGTCC
CACTCCAGGG CGCTGATCGT GGAGGTGATG GGCCGCCACG CCGGCTGGAT CGCCCTGCAC
TCGGGCCTGG CCGGCGGCGC CAACGTGATC CTGATCCCCG AGGTCACCTT CGACATCGAC
GAGGTCTGCG GCTGGATCGA ATCCCGCTTC GCCCGCGGCT ACGCCCCGAT CGTGGTGGTC
GCCGAGGGCG CGACCCCCAA GGACGGCCAG ATGGAGGTCT CCTCCGGCGA ACTCGACGCC
TTCGGCCACG TCCGCCTCGG CGGCATCGGC GAACGCCTCG CCGACGAGAT CGAGCGCCGC
ACCAAGAAGG AAGCCCGCAC CACCGTCCTG GGCCACACCC AGCGCGGCGG CACCCCCTCG
CCCTTCGACC GCTGGCTCGC CACCCGCTTC GGCCTCCACG CCATCGACGC CGTCCACGAC
GGCGACTTCG GCAAGATGGT CGCCCTGCGC GGCACCGACA TCGTGCGCGT GCCGCTCGCG
GCCGCCACGG CGACGCTGAA GACGGTGCCG ATGTCGCTGT ATGAGGAGGC GAAGGTCTTC
TTCGGCTAA
 
Protein sequence
MRIGVLTGGG DCPGLNAVIR ASVRKGVQFY GFEFVGFRDG WKGPLDRMTK PLDVEAVRGI 
LPRGGTILGS SRTNPLKVEG GVERIKENLA AEGVDALIAI GGEDTLGVAT VLGDEYGVNV
VGVPKTIDND LNATDYTFGF DTAVHVATEA IDRLHTTAES HSRALIVEVM GRHAGWIALH
SGLAGGANVI LIPEVTFDID EVCGWIESRF ARGYAPIVVV AEGATPKDGQ MEVSSGELDA
FGHVRLGGIG ERLADEIERR TKKEARTTVL GHTQRGGTPS PFDRWLATRF GLHAIDAVHD
GDFGKMVALR GTDIVRVPLA AATATLKTVP MSLYEEAKVF FG