| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6052 |
|---|
| Symbol | |
|---|
| ID | 8337415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6974302 |
|---|
| End bp | 6975324 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644959156 |
|---|
| Product | SMP-30/Gluconolaconase/LRE domain protein |
|---|
| Protein accession | YP_003116750 |
|---|
| Protein GI | 256395186 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3386] Gluconolactonase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAGC GTTCGAAGAT GGCCGCGGTG CGGTGGACGC CACCGCCGAA CCCGCAGCCG
GTGCGGCGGC GCGGTGATGT GCGGACGCTG CCGGAGGTGC GGCGGATCGC CTTGCCGGGC
GCCGGGCCCG AGCACATCGC GGTCGACACG GCCGGGAACT TGCTCACCGG TCTGGCCGAC
GGCCGCATCC TGCGCGTGAC GCCGGAGGGC GAGGTGCGCG CCGTCACGAC CACCGGCGGG
CGGCCGCTCG GGCTGGAGAT GCTCGGGGAG GACGCGCTGG TGGTGTGCGA CGCCTATCGC
GGGCTGCTGG AGGTGCAGCT GTCCAACGGG ACGGTTGGGG TGCTCGCGGC GAAGGTCGCG
GGGGAGCCGC TGACGTTCTG CAGCAACGCC GCCGTCGCCG CCGACGGGAG CATCTACTTC
ACGCAGTCCT CGCGGCACTT CAACATCGAC GCGTACCGCG GCGACCTGTT CGAGCACTCC
GCGACCGGCC GGCTGTTCCG CTACCGCGAC GGCGGCGTGG AGGTGGTCGC CGACGGCTTC
GCCTTCGCCA ACGGCGTCGT GCTCGTCGAG GACGGCGCGG CGGCGATCGT GGCCGAGACC
GGCGGCTACT GCCTGACCCG CGTTCAGCTC GAAGGCGCCG AGACCGGTCG CACCTCGCCC
TTCGGCGCCC CGCTGGCCGG CTTCCCCGAC AACCTCACCA GCGACGCCGA CGGCCTGATC
TGGGCCGCCA TGGTCTCGCC CCGCGACCCG GCGCTCGACT GGCTCCTGCC GAGGAACCCG
CGGCTGCGCT CGCTGGTGTG GGCCACGCCC GAGCGGTTGC AGCCGGCGGA GAAGGACGTG
GCGTGGGCCA TCGCGTTCGA CGCGAGCGGG GAGAAGGTGC GGGAGTTGCG CGGCTGGGGC
GTCGGCTATA AATCGGTCAC CTCGGCGCGA CGCAGTGGGG AAACGCTATA TCTGGGCAGC
CTGACGGAGA ACGCCATCGC TGTCCTCGAA CTCGGCTCTC TCGGCGCCGT GAAGAACATG
TGA
|
|---|
| Protein sequence | MAQRSKMAAV RWTPPPNPQP VRRRGDVRTL PEVRRIALPG AGPEHIAVDT AGNLLTGLAD
GRILRVTPEG EVRAVTTTGG RPLGLEMLGE DALVVCDAYR GLLEVQLSNG TVGVLAAKVA
GEPLTFCSNA AVAADGSIYF TQSSRHFNID AYRGDLFEHS ATGRLFRYRD GGVEVVADGF
AFANGVVLVE DGAAAIVAET GGYCLTRVQL EGAETGRTSP FGAPLAGFPD NLTSDADGLI
WAAMVSPRDP ALDWLLPRNP RLRSLVWATP ERLQPAEKDV AWAIAFDASG EKVRELRGWG
VGYKSVTSAR RSGETLYLGS LTENAIAVLE LGSLGAVKNM
|
|---|
| |