Gene Caci_6043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6043 
Symbol 
ID8337406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6965845 
End bp6966846 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content72% 
IMG OID644959147 
Productputative signal transduction histidine kinase 
Protein accessionYP_003116741 
Protein GI256395177 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGACGG CGCTGGATGG GCCGAGTGCG GGCGATCAGG TGCGGGCTCT GATACCGCTG 
GCGGCGGTGG TGGCGGGGAT GGGGTTGCTG CTGCGGGATC TGGCTGCTGA GCGGCGGGGG
GTGTGGTTGG ACGCCTCGGG TCGGCGGGGG CGGGCGGTGG ATGCGCGGAG CGCGGTGGGG
GTGTTGGTCG TCGGTGGGGC GCTGGTGCGG TTGTCGACCA ATGGCGCTTC GTTGGCGGCG
GAGGCCAGTG CGGTCATTGC GGCGCTCATT CTCTTCTCCG GCGGGGTGTT GATCGCGCTG
CCTTATGCGC TGCGGGTGTT GCGGGATCTG GATGCCGAGC GTGGTGAGCG GATTCGGGCT
CAGCAGTTCG CGGAGGTCGC CGCGCACATG CACGACTCGG TGCTGCACAC GCTGACGCTG
ATTCAGCGTG CTGATCCGCG GGACGTCGCC GGGCTCGCGC GGGCGCAGGA GCGGGAGCTG
CGGGCGTGGC TGTACGACCG GCGGGGGCGG GCGCTCGACG CCACCGAGCC GGAGACGTTC
GCCGGGGCGG TGCGGGCGGC GGCGGCCGAG GTGGAGGACC GGCACGGCGT GCGGGTGGAC
GTGGTCGCGG TCGGCGATGT GGCGCTCGGC GGTGCTCTGG CGGCGTGTGT CGCGGCTGCG
CGCGAAGCAC TGGTCAATGC TGCGAAATAT GCCGGTGGGG CGCCGATCGC GGTGTTCGCC
GAGGTGGAGA TGGTGATGGA TGCGGCGATG GTGATGGAGG TAGGAACAGA GGCGGAAACC
GAGGCAGGGG CGAAGTTCGG CGGCGCGGGG ATGGCGGCGC GTCGGGTCGA GATCTATGTC
CGGGATCGAG GACCAGGGTT CGATCTCGAC GCGGTGGGCG CCGACCGGAT GGGGATCCGG
GAGTCGATCG TCGGGCGCAT GGCTCGCCAC GGTGGGCACG CCGAAGTCCG CACCGCGCCC
GGAGCGGGCA CCGAGGTGCG GTTGGAGATG CGGTGTGAGT GA
 
Protein sequence
MVTALDGPSA GDQVRALIPL AAVVAGMGLL LRDLAAERRG VWLDASGRRG RAVDARSAVG 
VLVVGGALVR LSTNGASLAA EASAVIAALI LFSGGVLIAL PYALRVLRDL DAERGERIRA
QQFAEVAAHM HDSVLHTLTL IQRADPRDVA GLARAQEREL RAWLYDRRGR ALDATEPETF
AGAVRAAAAE VEDRHGVRVD VVAVGDVALG GALAACVAAA REALVNAAKY AGGAPIAVFA
EVEMVMDAAM VMEVGTEAET EAGAKFGGAG MAARRVEIYV RDRGPGFDLD AVGADRMGIR
ESIVGRMARH GGHAEVRTAP GAGTEVRLEM RCE