| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6030 |
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| Symbol | |
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| ID | 8337393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6951329 |
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| End bp | 6952360 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644959134 |
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| Product | aminotransferase class I and II |
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| Protein accession | YP_003116728 |
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| Protein GI | 256395164 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.426698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGAGG ACGAGGACCT GCGGCACCAC GGCGACGCCG AGCTGCGTGA CGTCGCCATC
AGTCACGACT TCGCAGTCAA CGTCCGCCTC CCGGAACCCC CGCGCTGGCT CCGCGACCGC
CTCGCCGAAG GCCTCGCGAC GCTCGCCGCC TACCCCGACG CCCGCGCCGC CACCGAAGCC
GTCGCCGAAC GCCACGGCCG CGCGCCGGAC GAAGTCCTGC TCACCTCGGG CGCCGCGGAG
GCGTTCGTCC TGCTTGCCAG GGTCCTGCGA CCCCGGCGCG CGCTCGTCGT GCACCCGCAG
TTCACCGAAC CCGAAGCCGC CCTGCGCGCC GCCGGTCACG ACGTCGAGCG CCACATCCTC
ACCGGCGACT TCACCCTCGA CCCGGAAGCG GTCCCGACCG AGCCCGACCT CGTGATGATC
GGCAACCCGA CGAACCCGAC CTCGGTTCTC CATCCGGCAG CGGCCATCGA ACGTCTCCGC
CGCCCCGGAC GCACCGTCGT CGTCGACGAA GCCTTCATCG ACGGCATCCC CGGCGAGACC
GAAACCCTTG CTGGACACTC GGATATCGTC GTCATCAGAA GCCTGACAAA GACCTGGGGA
CTCGCGGGAC TGCGCGTCGG CTACGTCCTC GGTCCGGCGC CGCTCATCAG GGCTCTGATA
GAGGCGCAAC CCCTCTGGTC GGTCTCCTCG CTGGCGCTCA TCGCCGCGCG AGCGGTCTGC
GACCCCGACG CGATCGCCGA AGCCGAAGCC CTCGCCAAAC AGGCCGACCA GGACCGCGAT
CACCTGCTGG CGCGCCTCAC CGAGATCCCC GGCGTCACCG TCCCCGCAGC CTCACGTGCC
CCCTTCGTCC TGGTCAGGGC GCCAAATGCC GTGCGACTCC GCGACCAGCT GCGCGCCGAG
GGCATCGCCG TACGCCGCGG TGACACCTTC CCCGGCCTCG GCCCGGACTG GCTGCGGGTC
GCCGTGCGCG GCCGGACCGC CACCGACCTG CTGATCGACC GCTGGAAGCA GCTCGCCGCG
ACGTCTTGGT AA
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| Protein sequence | MDEDEDLRHH GDAELRDVAI SHDFAVNVRL PEPPRWLRDR LAEGLATLAA YPDARAATEA
VAERHGRAPD EVLLTSGAAE AFVLLARVLR PRRALVVHPQ FTEPEAALRA AGHDVERHIL
TGDFTLDPEA VPTEPDLVMI GNPTNPTSVL HPAAAIERLR RPGRTVVVDE AFIDGIPGET
ETLAGHSDIV VIRSLTKTWG LAGLRVGYVL GPAPLIRALI EAQPLWSVSS LALIAARAVC
DPDAIAEAEA LAKQADQDRD HLLARLTEIP GVTVPAASRA PFVLVRAPNA VRLRDQLRAE
GIAVRRGDTF PGLGPDWLRV AVRGRTATDL LIDRWKQLAA TSW
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