| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5971 |
|---|
| Symbol | |
|---|
| ID | 8337334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 6892551 |
|---|
| End bp | 6892943 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644959076 |
|---|
| Product | Cupin 2 conserved barrel domain protein |
|---|
| Protein accession | YP_003116670 |
|---|
| Protein GI | 256395106 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTGT CGCCCTTCTC GCCCTTGTCG ACCCTCGCCG ACGCGCAGCC CTTCGCCCGC
GACGGCTTCA CCTTCCGCCC CCTGGCCGTA CCGTCGCGCG GCAGCGCCGA ACTCGCCGTC
TGGGCCCTGG ACCTGGTCCC CGGCGCCCGC AGCGAGACCC ACAGCATGGA CCGCGAGGAG
GTCTTCGTCG TCGTCGACGG CGCGGTCTCG GCCACGGTCG CCGACCGCGA GGTGAGCGCC
GGCCCGGGCG ACGCCATCAT CGTCCCGCCG CACGCCACCC TGCAGATCCG CAACGCCAGC
ACCGCCGAAC CGGCACGGCT GACGGTCGCG ACCTCGGTCG GGATGCGGGC GATCGTCGGC
GGCGCGCCGT TCACGCCGCC GTGGGCCCAG TAG
|
|---|
| Protein sequence | MSLSPFSPLS TLADAQPFAR DGFTFRPLAV PSRGSAELAV WALDLVPGAR SETHSMDREE
VFVVVDGAVS ATVADREVSA GPGDAIIVPP HATLQIRNAS TAEPARLTVA TSVGMRAIVG
GAPFTPPWAQ
|
|---|
| |