Gene Caci_5960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5960 
Symbol 
ID8337322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6880073 
End bp6880786 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content70% 
IMG OID644959064 
Productflavin reductase domain protein FMN-binding 
Protein accessionYP_003116659 
Protein GI256395095 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CGACCAGCAC GAGCACCACG CCGAGCACGA CCGGCACCGA TCGGGCCGAT 
CGGGCCGACC GGGACAACCG GGCCGACCAC GTCGCGATCG AGCCGTCGAT CCTCTACTTC
GGCACCCCGG TGGTGCTGCT GTCCACCGAG AACGACGACG GCTCGGCCAA CCTGGCGCCG
ATCTCCTCGG CCTGGGCCCT CGGGTCCACG ATCGTCCTGG GCCTCGGCGC TGAGGGGCAG
ACCGCGTACA ACCTCGCGCG CCGCCCGCAG ATCGTGATCA ACGTCCCCGG ACCGCATCTG
TGGCGCCGGA TCGAGAGCCT GGCGGGGGTG ACCGGACGGT TCCCGGTCCC GGAGAGCAAA
CCGGCGGGGA TGCGGTACGA GCCTGACAAG TTCGGTGTAT CAGGGTTCAC ATCCCAGGAG
TCGGAGGTTG TCATCCCGCC GCGGGTCGCC GAGTGCGGGC TGCAGTTCGA AGCCGCTGTG
GCGCGGGCGC TGCCGGACGT CACCGAGGAC TTCCTCATCG TCGAGGCGCA CGTGCTCAAG
GTGCACGCCG ATCCGGCGAT CGTGATCCCG GGCACGAACC ACGTGGAGCC GGCGGCGTGG
AGCCCGCTGA TCTACAACTT CCGCCACTAC TTCGGGCTCG GCGGCGAACT CGGGCACACC
TGGCGCAGCC AGACCCCGCG CGGCGCCGCA TCTCAGGACT CGCATACCCG TTAG
 
Protein sequence
MSTTTSTSTT PSTTGTDRAD RADRDNRADH VAIEPSILYF GTPVVLLSTE NDDGSANLAP 
ISSAWALGST IVLGLGAEGQ TAYNLARRPQ IVINVPGPHL WRRIESLAGV TGRFPVPESK
PAGMRYEPDK FGVSGFTSQE SEVVIPPRVA ECGLQFEAAV ARALPDVTED FLIVEAHVLK
VHADPAIVIP GTNHVEPAAW SPLIYNFRHY FGLGGELGHT WRSQTPRGAA SQDSHTR