| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5959 |
|---|
| Symbol | |
|---|
| ID | 8337321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6879246 |
|---|
| End bp | 6880007 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644959063 |
|---|
| Product | putative transcriptional regulator, ArsR family |
|---|
| Protein accession | YP_003116658 |
|---|
| Protein GI | 256395094 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0640] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTA CCGGCCCTGT CACCACTGAC GCGGCGAGCC CCGCGAACCC CCTGCTGGCC
GGCGCCGACC TGGCCGCCAT CGCCCGCCTG CTGGCCGACG GCACCCGCGC CACGTTCTGC
CTGGCCCTGC TCGACGGCCG CGCCTGGACC CCGACCGAAC TGGCGCGGCA CGCCGGCGTC
GCGGCGTCCA CCGCCACCGA GCACCTGAAC GCGATGGTCG CCGGCGGCCT GCTCGCCGAG
GAACGCCAAG GCCGGCACCG CTACGTCCGC CTCGCCGACC AGCAGATCGC CGAACTGATC
GAGACCCTGG CCGCCGCCGC CCCGGTCCGT TCCGCACCGC CGCCGCGCAC GCTGTCCGCC
GACAGCCGCC GGCGCGCGCT GGCCCACGCC CGCACCTGCT ACGACCACCT CGCCGGGCGC
GTCGGCGTGG CGATCGCGGA CGCGATGACC GAGCGCGAGC TGGTCGACTG GGAGCACGGT
CTGAGCCTGA CCCCGGACGG CGCGCGCTGG CTGGCCGAAC TCGGGATCGA GGTCCCGACC
GCCGCCAAGC GCCCGGCGCT GCGCCCCTGC CTGGACTGGA CCGAACGCCG CCCGCATCTG
GCCGGCGCCG TCGGCGCGGC GCTGTGCGGC CACGCTCTGG ACAAGGGCTG GATCAAGCGC
GTCGGGACCA CGCGCGCGGT GTTGGTGACG CCGGCCGGAC GCGAGATCCT CGCCGCGCGG
CTCGGGCTGT CCGAACAGGT GCTGACACCG TCCGCGCACT GA
|
|---|
| Protein sequence | MSTTGPVTTD AASPANPLLA GADLAAIARL LADGTRATFC LALLDGRAWT PTELARHAGV
AASTATEHLN AMVAGGLLAE ERQGRHRYVR LADQQIAELI ETLAAAAPVR SAPPPRTLSA
DSRRRALAHA RTCYDHLAGR VGVAIADAMT ERELVDWEHG LSLTPDGARW LAELGIEVPT
AAKRPALRPC LDWTERRPHL AGAVGAALCG HALDKGWIKR VGTTRAVLVT PAGREILAAR
LGLSEQVLTP SAH
|
|---|
| |