Gene Caci_5930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5930 
Symbol 
ID8337292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6844022 
End bp6844750 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content69% 
IMG OID644959034 
Producthypothetical protein 
Protein accessionYP_003116629 
Protein GI256395065 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0670577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG ATGTTGTCGA CGAATCGGTT CCGGCGGACG GAACGCGTGG GCAGCATGTG 
CTCGACCTTC TGGACAAGGC CATCAACACG CAGACCCCGC TGGTGCGCAA GAACATCGCG
CGGGCCCGGC AGAAGAACCC GGAAGCGCCG CCGGCGCGCG TGATCCGGAA CCTGGAGCGG
ATGTATGTCA GTGCTTTGAC CGGCTCTGGC GCCGCGGTGG GAGGAACCGC GGCGGCGCCC
GGTGTCGGCA CGGGAGTCGC GCTGGCCCTG TCGGCGGGCG AGGCTCTGTC GTCGCTGGAG
CTGAGCGTCT TGTTCGCGCT GTCGATCGCC GAGGTCCACG GGGTTCGCAT CGACGAGATC
GAGCGCCGCC GGACCATCGT GATGGGCATC ATGCTCGGCG GGTCGGGCTC GTCCACCATC
GCCAAGATCT CCGAGCGCAC GGGACAGCAC TGGGGACGTC AGATCGTCGC CAAGGTGCCC
GCCGAGAGCC TGCGCCAGAT CAACAAGGTC CTGGGACGGA ACTTCGTCAC CAAATACGGG
ACCAAGCAGG GAGTCATCGT CCTCGGTCGG GTGGCGCCGT TCGGGATCGG CGCCGTGATC
GGCGGCGGCG CCAACGCCGC GCTCGCGACG CTGTCGGTGC GGGCCGGTCG CCGCGCGTTC
GGCCCGCCGC CGGAAGCGTG GCCGGAATCC GAACACAGCG CGGCAGCAGA GCCGATTTCG
GCGCCGTGA
 
Protein sequence
MTIDVVDESV PADGTRGQHV LDLLDKAINT QTPLVRKNIA RARQKNPEAP PARVIRNLER 
MYVSALTGSG AAVGGTAAAP GVGTGVALAL SAGEALSSLE LSVLFALSIA EVHGVRIDEI
ERRRTIVMGI MLGGSGSSTI AKISERTGQH WGRQIVAKVP AESLRQINKV LGRNFVTKYG
TKQGVIVLGR VAPFGIGAVI GGGANAALAT LSVRAGRRAF GPPPEAWPES EHSAAAEPIS
AP