Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5930 |
Symbol | |
ID | 8337292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6844022 |
End bp | 6844750 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644959034 |
Product | hypothetical protein |
Protein accession | YP_003116629 |
Protein GI | 256395065 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0670577 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCG ATGTTGTCGA CGAATCGGTT CCGGCGGACG GAACGCGTGG GCAGCATGTG CTCGACCTTC TGGACAAGGC CATCAACACG CAGACCCCGC TGGTGCGCAA GAACATCGCG CGGGCCCGGC AGAAGAACCC GGAAGCGCCG CCGGCGCGCG TGATCCGGAA CCTGGAGCGG ATGTATGTCA GTGCTTTGAC CGGCTCTGGC GCCGCGGTGG GAGGAACCGC GGCGGCGCCC GGTGTCGGCA CGGGAGTCGC GCTGGCCCTG TCGGCGGGCG AGGCTCTGTC GTCGCTGGAG CTGAGCGTCT TGTTCGCGCT GTCGATCGCC GAGGTCCACG GGGTTCGCAT CGACGAGATC GAGCGCCGCC GGACCATCGT GATGGGCATC ATGCTCGGCG GGTCGGGCTC GTCCACCATC GCCAAGATCT CCGAGCGCAC GGGACAGCAC TGGGGACGTC AGATCGTCGC CAAGGTGCCC GCCGAGAGCC TGCGCCAGAT CAACAAGGTC CTGGGACGGA ACTTCGTCAC CAAATACGGG ACCAAGCAGG GAGTCATCGT CCTCGGTCGG GTGGCGCCGT TCGGGATCGG CGCCGTGATC GGCGGCGGCG CCAACGCCGC GCTCGCGACG CTGTCGGTGC GGGCCGGTCG CCGCGCGTTC GGCCCGCCGC CGGAAGCGTG GCCGGAATCC GAACACAGCG CGGCAGCAGA GCCGATTTCG GCGCCGTGA
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Protein sequence | MTIDVVDESV PADGTRGQHV LDLLDKAINT QTPLVRKNIA RARQKNPEAP PARVIRNLER MYVSALTGSG AAVGGTAAAP GVGTGVALAL SAGEALSSLE LSVLFALSIA EVHGVRIDEI ERRRTIVMGI MLGGSGSSTI AKISERTGQH WGRQIVAKVP AESLRQINKV LGRNFVTKYG TKQGVIVLGR VAPFGIGAVI GGGANAALAT LSVRAGRRAF GPPPEAWPES EHSAAAEPIS AP
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