Gene Caci_5904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5904 
Symbol 
ID8337266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6812300 
End bp6812818 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content67% 
IMG OID644959008 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003116603 
Protein GI256395039 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.174555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTATT TAACCACGGC ACACCCGGAT GTTGAGCACG AGACGGCACC CGCATACCGT 
GGCACCGTGA GCCGCGCCGA CCTCCCCGCC GCCCTGGACA ACCGCCGCGA CCCCGTGACA
GCGGAGGTAT TGGAGCTCTT CTGGGCCGCC TCCCAGAGCT TCTACGACAA CTACGACGAA
GCCGCCGCCC GCCACGACCT GACCCGGATG CAGGCATTCG TGCTGGCCAA CCTCATGGCC
GGCCCAAAAC CGATGCGCTT CCTGGCCGAA CACCTCAAGT GCGAACCCTC GAACATCACC
GGCCTGGTGG ACCGCATGGA AGCCCGCGGC CTCGTCACCC GCGAGCCCGA CCCAGAGGAC
CGCCGCGTGA AGAGAATCAC AGCCACCGAA CTCGGCCGCG CCTCCTTCGA CGCCGTGTGG
AGCGGCCTGA CCTTCGCCGC CGAACCCCTG GCCGGACTGA GCGGCAGCGA GCGCGAAACG
CTGCGGGATC TACTGCGGCG GATTGTGCCG GGCGCTTAG
 
Protein sequence
MKYLTTAHPD VEHETAPAYR GTVSRADLPA ALDNRRDPVT AEVLELFWAA SQSFYDNYDE 
AAARHDLTRM QAFVLANLMA GPKPMRFLAE HLKCEPSNIT GLVDRMEARG LVTREPDPED
RRVKRITATE LGRASFDAVW SGLTFAAEPL AGLSGSERET LRDLLRRIVP GA