Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5904 |
Symbol | |
ID | 8337266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6812300 |
End bp | 6812818 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644959008 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003116603 |
Protein GI | 256395039 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.174555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTATT TAACCACGGC ACACCCGGAT GTTGAGCACG AGACGGCACC CGCATACCGT GGCACCGTGA GCCGCGCCGA CCTCCCCGCC GCCCTGGACA ACCGCCGCGA CCCCGTGACA GCGGAGGTAT TGGAGCTCTT CTGGGCCGCC TCCCAGAGCT TCTACGACAA CTACGACGAA GCCGCCGCCC GCCACGACCT GACCCGGATG CAGGCATTCG TGCTGGCCAA CCTCATGGCC GGCCCAAAAC CGATGCGCTT CCTGGCCGAA CACCTCAAGT GCGAACCCTC GAACATCACC GGCCTGGTGG ACCGCATGGA AGCCCGCGGC CTCGTCACCC GCGAGCCCGA CCCAGAGGAC CGCCGCGTGA AGAGAATCAC AGCCACCGAA CTCGGCCGCG CCTCCTTCGA CGCCGTGTGG AGCGGCCTGA CCTTCGCCGC CGAACCCCTG GCCGGACTGA GCGGCAGCGA GCGCGAAACG CTGCGGGATC TACTGCGGCG GATTGTGCCG GGCGCTTAG
|
Protein sequence | MKYLTTAHPD VEHETAPAYR GTVSRADLPA ALDNRRDPVT AEVLELFWAA SQSFYDNYDE AAARHDLTRM QAFVLANLMA GPKPMRFLAE HLKCEPSNIT GLVDRMEARG LVTREPDPED RRVKRITATE LGRASFDAVW SGLTFAAEPL AGLSGSERET LRDLLRRIVP GA
|
| |