Gene Caci_5897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5897 
Symbol 
ID8337259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6804281 
End bp6805069 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content72% 
IMG OID644959001 
Producthypothetical protein 
Protein accessionYP_003116596 
Protein GI256395032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.829788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAG CGGCACCTAA GGACGACGTC AGGCGCGCCT GGCTCGACGA GGACGAGGCG 
AACCTGTCGG CGGCGCGCGT GGCCAAGCAC CGGCTGGTGG AGCAGGTGCG GCGGCTGGTG
GACGCGGCGT TCCAGCTGGA CAGCGGGGAC GCCGGATACC CACCGAGCGA TACCGACAAT
ACCGACGACA CAGACAGCAC CGACGGCGCC GCCCCGCCGA GCGACTCCGA CCAGCCCGGC
GACACCGACC GCGCGGCGCA CTTCATGGCC CTGGCCGCCG AGGCCGAGGC GCTGGCCGAC
CGCGTCGGCG CGCTGCCCCG CATCCCGCGC GCCGAGGTCG ACGGCGTGAA CGCCAGCCAG
GCCCGCCGCC ACGACACCCT GCTGGTCGAG CGCTCGACCA TCAACGGCCG CGGCAACCCC
CTGGCGCCGC CGATGCGCAT GTGGGCCGAC GGCGAGGTGA TCCGCGGCGA GGTGTTCTTC
ACGGCGCCGT ACGAGGGACC GGCCGGGCGC GTGCACGGGG CGTGGGTCGC AGCGTGCTTC
GACGAGATCC TCGGCTGCGC CCAGGGCGCC TCCGGCGCGT TCGGATACAC CGGGACCCTG
ACGATCACCC TGCGGCGCGC GACACCGCTG TACACGAAGA TCACTTACGA GGCAGGATTC
TCCCACCGCG AGGGACGCAA GATCCACGGC TGGGGCCGGT GCTACGCCGA CGGAAAGCTG
ACGGCCGAGG CCACGGGGGT CTTCGTGATA CCCGTCCTGG GACGGATCGG GCACGGGACC
CGGGAGTAA
 
Protein sequence
MTEAAPKDDV RRAWLDEDEA NLSAARVAKH RLVEQVRRLV DAAFQLDSGD AGYPPSDTDN 
TDDTDSTDGA APPSDSDQPG DTDRAAHFMA LAAEAEALAD RVGALPRIPR AEVDGVNASQ
ARRHDTLLVE RSTINGRGNP LAPPMRMWAD GEVIRGEVFF TAPYEGPAGR VHGAWVAACF
DEILGCAQGA SGAFGYTGTL TITLRRATPL YTKITYEAGF SHREGRKIHG WGRCYADGKL
TAEATGVFVI PVLGRIGHGT RE