Gene Caci_5893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5893 
Symbol 
ID8337255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6800540 
End bp6801205 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content70% 
IMG OID644958997 
Producthypothetical protein 
Protein accessionYP_003116592 
Protein GI256395028 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.574937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA ACACTTTGTG GTTCAGCAAC AACCACCGCG ACTACTCCAA CCAATACGGC 
AACGACGCCG GGTTCGAGTT CGAGTTCTAC TGCCAGCGCT GCAGCGACAC CTGGCGCAGC
GGCTTCGAGC CGTACAAGGC GGCGCGCGCC GCCGGCTGGA TCCGCCGCGC CTCGAACATG
GCCAGCGGCG CGGCGTCCTC GATCGGCTGG GACGTCGCCG AGGGCGTCGA CGGTCTGGTG
CAAAGCGGCT GGCACAAGGC GCGGGACGCC TCCTTCAAGG AGGCGATCAC CTCTGCCGAG
CAGCACTTCA ATCGATGTGG CCGCTGCACG TCCTACGTCT GCGCGCGCTG CTACAGCACC
GAGCGCGGTC TGTGCACGAA CTGCGCTCCG GACCTGGCCG CCGAGGTGGA GTCCGCGCGC
ACCCACGGCT TGGTCGACGC CGCCACCTCG CGTGCCCGCG ACGTCGGCGC CACGATGGCC
GCCGAGGTGG ACGTCGCCAC GCAGAAGCAG CTGGTGTGCC TGTCCTGCGG GCACGAGACG
CACGGCGCGA AGTTCTGCCC GGAGTGCGGG GCGAAGCAGA ACGCTGAGCC GGGACCGTGC
GGCGGGTGCG GGTCACCGGT GCCGACGGGG TCGAAGTTCT GCCCGGAGTG CGGGCACGTG
CAGTAG
 
Protein sequence
MADNTLWFSN NHRDYSNQYG NDAGFEFEFY CQRCSDTWRS GFEPYKAARA AGWIRRASNM 
ASGAASSIGW DVAEGVDGLV QSGWHKARDA SFKEAITSAE QHFNRCGRCT SYVCARCYST
ERGLCTNCAP DLAAEVESAR THGLVDAATS RARDVGATMA AEVDVATQKQ LVCLSCGHET
HGAKFCPECG AKQNAEPGPC GGCGSPVPTG SKFCPECGHV Q