| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5883 |
|---|
| Symbol | |
|---|
| ID | 8337245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6791016 |
|---|
| End bp | 6791723 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644958987 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003116582 |
|---|
| Protein GI | 256395018 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.908268 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCCG AACCGGAACG GGTCCTGCGG ATGCGCGAAG CGTCCGAAGC GGTCGAGAAG
ATCGGCTGGC GCTACCTGCT GGGCACGCTG CGCACCGCGG TCGCCGTGAC CTCGCTGGCG
CAGGGCAGCA CGGTCGCGGC CAAGGCCGTC GAAGCCTGCG CCGCCTATGC CGACCGCCAC
CTGTGGGCCG ACCTGCGCGC CGACAAGGTC GTCCTGGTCC TCCAATCACT CGACGCCGCC
GCGGTGACGA ACGTCGACGC CGAACTGGCG GGCCGCGTGT CGCTGGCAGT ACGCGAGGTC
GGCCTGATCA CCTCAGCGGA CGTCGGCAGC GAGGAATCCC GAGCCCTCCA GCTGGTGGAG
ATCGCCGTGG ACGCGCTGGA CATCCCGAAG GTCCGCCCCT TCTGGAAGGC GGTATTCGCC
TACGAGGACG AAGTCCTCAC CGCCGGCCCG ACAGACGCCC TCGTCGACCC CCAACGCCAG
GGCCCAGCCA TCTGGTTCCA GCAAATGGAC GCCCCCCGCC CCCAACGCAA CCGCATCCAC
TTCGACATCT GCGTCCCCCA CGACGAAGCC CAACGCCGCA TCGCCGCCGG CCTCGCCGCA
GGCGGCCGCC TGACGTACGA CGCGGAGGCA CCCGCGTTCT GGGTCCTCGC CGACCCCGAG
GGCAACGAGG TCTGCATCAC GACGTGGCAG GGGCGGCAGC CGGATTAG
|
|---|
| Protein sequence | MAAEPERVLR MREASEAVEK IGWRYLLGTL RTAVAVTSLA QGSTVAAKAV EACAAYADRH
LWADLRADKV VLVLQSLDAA AVTNVDAELA GRVSLAVREV GLITSADVGS EESRALQLVE
IAVDALDIPK VRPFWKAVFA YEDEVLTAGP TDALVDPQRQ GPAIWFQQMD APRPQRNRIH
FDICVPHDEA QRRIAAGLAA GGRLTYDAEA PAFWVLADPE GNEVCITTWQ GRQPD
|
|---|
| |