Gene Caci_5881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5881 
Symbol 
ID8337243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6789072 
End bp6790499 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content68% 
IMG OID644958985 
Productbeta-lactamase 
Protein accessionYP_003116580 
Protein GI256395016 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCCC CGCGCCCCCT GCTTCCACGT TCGACACCGG CCGCCTCGGG AATTTCGTCG 
CGTTCGATCG CCGCGCTGCT GGACCGGCTG GAAGCACGAT CCGTCGAGTG CCACTCCATC
ATGGTCGTGC ACCGCGGTCA CGTCGTCGCC GAAGGCTGGT GGGCGCCGTA CTCGGCCGAG
CGCCCGCATC TTCTCTACTC GCTGACCAAG TCGTTCACGG CGATCGCCGT GGGGCTCGCG
GTCGCCGACG GGCTACTCTC GCTGGACGAT CGAGTGGTGC ACGTGTTGCC CGACCACGTC
CCGGCCGACG TCTCGGAGCA GGCAAGCCGC ATCACCGTTC ACCACCTGCT GTCCATGACA
GCGGGGCACG CCACGGACAG CCTCACCGAA GCCTGGGAGC GGGAGCCCGA CGACTTGGTG
AAGGGCTTCC TGGGCCTGCC CTTCGCCGCG GCCGAGGGAA CGCGGCACAC CTACGACAAC
TCAACCACCT TCATCCTGGC CCGGATGGTG GAACGGGTCA CGGGTCGCGG TCTCCCGGAG
TTCCTCGACA AGCGCCTCTT CAAGCCGATG GGCATCGACC ACGCCGAATG GGATCGGGTG
AGAAGCGGCG CCGCCTTCGG ATTCCACGGA CTACACCTCA CCACCGAGGC CATTGCCTCC
TTCGGCGAAC TGCTGCGCCG CGGAGGGATG TGGGGCGACC AACAACTCGT CCCACGCGGT
TGGGTGGAGC TGGCGACCAG ACGGCACATC GACAGCGAGT GGATCCTGGA CGGATCGGAC
CAGGCGGACT TCTCTTACGG CTACGGCTAC CAGTTCTGGA TGTCGCGTCA CGGGTACCAC
GGTCATGGCT CCTTCGGACA GCAGTGTGTG GTGGTCCCGT CGCACGATCT CGTGGTCGCC
GTGACCGCCC AAGGAGAAGC TCAGAAGGTG CTTGATGCCA TGTGGGAGTG TCTGCTGCCC
GGCGTGGGCC ATGCAGGAAG CGACGAGGAC GACGAGATGC TCGCCGACCG GCTGCGGCGA
CTGTCATTGC CGCCGGTGCC CGGTTCCGCC GACCCGGGGC GTTCGGCCAG CGCGACACTC
GACGCCTCCG CTGAGGGCTC GGCCCTGCCT GACGGAACGA CGGTGATCAT CGATCCCACC
GACGGCGGAT GGCTCGTACG GTTCGAGTCG CTCCTCGACG TCGAGGTCGG CCACGGCGGC
TGGCGGGAAA GCTCCCCGCT CGGCCGACCT GTCGTCGCGG CCGGCGCCTG GCAGGGCAGC
ACATTCGTCG CCGATCTCTA CGTCGTCACC ACCCCGCACC GCGTTCGGCT GGTCCTCGAC
ACCGAGGCGG GGACCGCGAC GGCGACATGG AGCACCGTGC CACTGACCGG CCCCCGTCTG
GAGCTGCACG TGCGGTCGCC ACTGATGACA CGACCTGACG TCGCGTAG
 
Protein sequence
MPSPRPLLPR STPAASGISS RSIAALLDRL EARSVECHSI MVVHRGHVVA EGWWAPYSAE 
RPHLLYSLTK SFTAIAVGLA VADGLLSLDD RVVHVLPDHV PADVSEQASR ITVHHLLSMT
AGHATDSLTE AWEREPDDLV KGFLGLPFAA AEGTRHTYDN STTFILARMV ERVTGRGLPE
FLDKRLFKPM GIDHAEWDRV RSGAAFGFHG LHLTTEAIAS FGELLRRGGM WGDQQLVPRG
WVELATRRHI DSEWILDGSD QADFSYGYGY QFWMSRHGYH GHGSFGQQCV VVPSHDLVVA
VTAQGEAQKV LDAMWECLLP GVGHAGSDED DEMLADRLRR LSLPPVPGSA DPGRSASATL
DASAEGSALP DGTTVIIDPT DGGWLVRFES LLDVEVGHGG WRESSPLGRP VVAAGAWQGS
TFVADLYVVT TPHRVRLVLD TEAGTATATW STVPLTGPRL ELHVRSPLMT RPDVA