Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5881 |
Symbol | |
ID | 8337243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6789072 |
End bp | 6790499 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644958985 |
Product | beta-lactamase |
Protein accession | YP_003116580 |
Protein GI | 256395016 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCCC CGCGCCCCCT GCTTCCACGT TCGACACCGG CCGCCTCGGG AATTTCGTCG CGTTCGATCG CCGCGCTGCT GGACCGGCTG GAAGCACGAT CCGTCGAGTG CCACTCCATC ATGGTCGTGC ACCGCGGTCA CGTCGTCGCC GAAGGCTGGT GGGCGCCGTA CTCGGCCGAG CGCCCGCATC TTCTCTACTC GCTGACCAAG TCGTTCACGG CGATCGCCGT GGGGCTCGCG GTCGCCGACG GGCTACTCTC GCTGGACGAT CGAGTGGTGC ACGTGTTGCC CGACCACGTC CCGGCCGACG TCTCGGAGCA GGCAAGCCGC ATCACCGTTC ACCACCTGCT GTCCATGACA GCGGGGCACG CCACGGACAG CCTCACCGAA GCCTGGGAGC GGGAGCCCGA CGACTTGGTG AAGGGCTTCC TGGGCCTGCC CTTCGCCGCG GCCGAGGGAA CGCGGCACAC CTACGACAAC TCAACCACCT TCATCCTGGC CCGGATGGTG GAACGGGTCA CGGGTCGCGG TCTCCCGGAG TTCCTCGACA AGCGCCTCTT CAAGCCGATG GGCATCGACC ACGCCGAATG GGATCGGGTG AGAAGCGGCG CCGCCTTCGG ATTCCACGGA CTACACCTCA CCACCGAGGC CATTGCCTCC TTCGGCGAAC TGCTGCGCCG CGGAGGGATG TGGGGCGACC AACAACTCGT CCCACGCGGT TGGGTGGAGC TGGCGACCAG ACGGCACATC GACAGCGAGT GGATCCTGGA CGGATCGGAC CAGGCGGACT TCTCTTACGG CTACGGCTAC CAGTTCTGGA TGTCGCGTCA CGGGTACCAC GGTCATGGCT CCTTCGGACA GCAGTGTGTG GTGGTCCCGT CGCACGATCT CGTGGTCGCC GTGACCGCCC AAGGAGAAGC TCAGAAGGTG CTTGATGCCA TGTGGGAGTG TCTGCTGCCC GGCGTGGGCC ATGCAGGAAG CGACGAGGAC GACGAGATGC TCGCCGACCG GCTGCGGCGA CTGTCATTGC CGCCGGTGCC CGGTTCCGCC GACCCGGGGC GTTCGGCCAG CGCGACACTC GACGCCTCCG CTGAGGGCTC GGCCCTGCCT GACGGAACGA CGGTGATCAT CGATCCCACC GACGGCGGAT GGCTCGTACG GTTCGAGTCG CTCCTCGACG TCGAGGTCGG CCACGGCGGC TGGCGGGAAA GCTCCCCGCT CGGCCGACCT GTCGTCGCGG CCGGCGCCTG GCAGGGCAGC ACATTCGTCG CCGATCTCTA CGTCGTCACC ACCCCGCACC GCGTTCGGCT GGTCCTCGAC ACCGAGGCGG GGACCGCGAC GGCGACATGG AGCACCGTGC CACTGACCGG CCCCCGTCTG GAGCTGCACG TGCGGTCGCC ACTGATGACA CGACCTGACG TCGCGTAG
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Protein sequence | MPSPRPLLPR STPAASGISS RSIAALLDRL EARSVECHSI MVVHRGHVVA EGWWAPYSAE RPHLLYSLTK SFTAIAVGLA VADGLLSLDD RVVHVLPDHV PADVSEQASR ITVHHLLSMT AGHATDSLTE AWEREPDDLV KGFLGLPFAA AEGTRHTYDN STTFILARMV ERVTGRGLPE FLDKRLFKPM GIDHAEWDRV RSGAAFGFHG LHLTTEAIAS FGELLRRGGM WGDQQLVPRG WVELATRRHI DSEWILDGSD QADFSYGYGY QFWMSRHGYH GHGSFGQQCV VVPSHDLVVA VTAQGEAQKV LDAMWECLLP GVGHAGSDED DEMLADRLRR LSLPPVPGSA DPGRSASATL DASAEGSALP DGTTVIIDPT DGGWLVRFES LLDVEVGHGG WRESSPLGRP VVAAGAWQGS TFVADLYVVT TPHRVRLVLD TEAGTATATW STVPLTGPRL ELHVRSPLMT RPDVA
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