| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5867 |
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| Symbol | |
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| ID | 8337228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6774932 |
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| End bp | 6776005 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644958971 |
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| Product | DNA polymerase LigD, polymerase domain protein |
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| Protein accession | YP_003116566 |
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| Protein GI | 256395002 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.890125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.143768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTCCTG GGGTGCGCAT GTCAGTGGCG GGCCGTAGCC TGCCGACTAT GGGTTCTGCC
GAAGCGCACG TGGAAGCCGG TGGTCGCAGC GTCCGGATCT CCTCACCGGA CAAGCTTCTG
TTCCCGGACG CCGACGTCAC CAAACTCGGC CTCGCCACGT ACTACGCCGC CGTCGCCGAC
GGTCTGTTCC GCGGCCTGGC GAACCGCCCC GTCGCCCTGA ACCGCTTCCC GGACGGCCTC
GGCGGCAAGT CCTTCTTCAC CAAGTCCGCG CCGAAGGGCC TGCCGGACTG GGCTTCGACC
GCGCACGTGA CCTTCCCCAG CGGCCGCACC GGCGACGAGG TCTGCGTCAC CGAGCCGGCC
ACGGTCCTGT GGACGGTCCA GATGGGCACG CTGGAGCTGC ACGCCTGGCC GGTCCGCGAA
GCCGACACCG ACCACCCCGA CGAGCTGCGC ATCGACCTGG ACCCGCAGCC CGGCACCGGG
TTCGCCGAGG CCGTCGAGGT CGCGCGCGAG GCGCTGGCGC TGTTCGAGGA GCTGGGCATC
CGGCCGTTCG TGAAGACCTC CGGCGGCCGC GGCCTGCACC TGCTGGTCCG CATCGAGCCG
CGCTGGACGT TCGTCGAGGC GCGGCGCGCC GTGATCGCCC TGGCCCGCGA GCTGGAGCGG
CGGCGCCCGG AGATGGTGAC GACGTCCTGG TGGAAGGAGG AGCGCGGCGA ACGCATCTTC
ATCGACTTCA ACCAGATGGC CCGCGACCGC ATGACCGTGG CGCCCTACTC CACCCGCGCC
CGCCCCGACG CGCCGGTGTC GATGCCGGTC CGCTGGGCCG ACCTGGCGGA CGTGGCGCCC
GGGGACTTCA CCGTGAAGAC CGTCCCGGAC CTGTTCGCCA AGAACGGCGA CGCCAACGCC
GAGATCGACG ACACCGCGCA CAGCCTGGAC GCGCTGCTGG AGATGGCCGA GCGCGACGAG
AAGGACCACG GTCTGGGCGA CATGCCCTAC CCGCCGGACT TCCCCAAGAT GCCCGGCGAA
CCCAAGCGGG TCCAGCCTTC CAAGGCTCGT CACGACCAAG AGGGCGGCAG CTGA
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| Protein sequence | MCPGVRMSVA GRSLPTMGSA EAHVEAGGRS VRISSPDKLL FPDADVTKLG LATYYAAVAD
GLFRGLANRP VALNRFPDGL GGKSFFTKSA PKGLPDWAST AHVTFPSGRT GDEVCVTEPA
TVLWTVQMGT LELHAWPVRE ADTDHPDELR IDLDPQPGTG FAEAVEVARE ALALFEELGI
RPFVKTSGGR GLHLLVRIEP RWTFVEARRA VIALARELER RRPEMVTTSW WKEERGERIF
IDFNQMARDR MTVAPYSTRA RPDAPVSMPV RWADLADVAP GDFTVKTVPD LFAKNGDANA
EIDDTAHSLD ALLEMAERDE KDHGLGDMPY PPDFPKMPGE PKRVQPSKAR HDQEGGS
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