Gene Caci_5843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5843 
Symbol 
ID8337204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6747406 
End bp6748047 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID644958947 
ProductHemerythrin HHE cation binding domain protein 
Protein accessionYP_003116542 
Protein GI256394978 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.737154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.680441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG ACCCGGCCAC GAGCACCGCC GGCCGCATCG ACTTCACCTT GATGTACATC 
ACCCACGACG CCTTCCGCCG CGACCTGTCC CGGCTGCGCC GTGCCGCCGC CGAGGGCCGC
ACCGACAGTG TCGGCGTCCA TGACGGCTGG GAGAACTTCA AGCGCCAGCT ACACGTCCAC
CACACCGCCG AGGACGAGGC GCTGTGGCCG CGCGTCGAAG CCGCCGGCGC CGCGCGCCCC
GACACCGCCG AGATCCTCGC CGCCATGGCC GCCGAGCACG CGCGTCTGGA CCCGCTGCTG
GAAGCCGTGG ATGTCGCCAT GGAGGAGCGC AGAGACTCCG AAGACCTGGC CGGAGCAGTG
GCGTTCCTGG AGGCGGCGCT CAACGACCAC ATGAAGCACG AAGAGCAAGC CGCGCTCCCG
CTGATTCAGG AAGTCCTGAC TCCCAAGGAC TGGGCCGCCT TCAGCCGCGC GATCGCCCGC
AAGCAGAAGC TGTCCGGCGC CGCCGCCTAC GTCCCGTGGG TCATCGACGG CGCCGACGAC
GCGCAGCGTG CGGCGTTCTT CACCGCTATG CCCGCCCCTG TCAAGGTACT GAATCGCATG
TTCTGGAGCT CGCGGTATCA CAAGCGCCAT CCGTGGGTGT GA
 
Protein sequence
MSTDPATSTA GRIDFTLMYI THDAFRRDLS RLRRAAAEGR TDSVGVHDGW ENFKRQLHVH 
HTAEDEALWP RVEAAGAARP DTAEILAAMA AEHARLDPLL EAVDVAMEER RDSEDLAGAV
AFLEAALNDH MKHEEQAALP LIQEVLTPKD WAAFSRAIAR KQKLSGAAAY VPWVIDGADD
AQRAAFFTAM PAPVKVLNRM FWSSRYHKRH PWV