Gene Caci_5838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5838 
Symbol 
ID8337199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6743756 
End bp6744748 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content71% 
IMG OID644958942 
ProductAcetyl xylan esterase 
Protein accessionYP_003116537 
Protein GI256394973 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3458] Acetyl esterase (deacetylase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.145692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG ACCGGCTGTC CCAGAGCGCG GGTGTCCCGC AGCACCCCTT TCCGTTCGAC 
CCGGCCTACG GCCTGGACCT CGACGGTCTG CTGAAGGTCG CGGCGCCGGA CACCGTGCCG
GCTGACTTCG CCGAGTTCTG GCAGGACATG TACCGCCGCG CGCTCGCGAC TCCGGTCGAT
CCCCGGCTCG GCGCCAAGGC CGGGAGCACC GCCGCCGGTC TCGACGTCTT CGAGGTCTCC
TTCACCTCGC TCGGCGGCAT CCGGATCGGC GGATGGATCG TCGTCCCGCC CGATGGCGTC
GTCGAGCGCG GGTTCGTCGT CGGCCACGGC TACGGCGGCC GCGACGAACC GGCTCCGGAG
CTGCCCGCTA CCGACGCGGC CGGAATCTAT TTCGTGGCAC GGGGATTGCC GACGAAGAGC
CTGCTTTCCG GCGTCCCGTC CGAGGCGCCC GGACACGTAT TGCAGGGCAT TGAGTCGCGG
GCGGACTACA TCATCGGCGG CTGTGTCGCC GACCTCTGGT GTGCGGCGAC GGCGCTGACC
GAGCTGTTTC CCGCGACCGC ACGCCGCCTC GATTACACCG GCGTCAGCTT CGGTGGCGGG
ACCGGGGCGC TCGCACTCCC GTGGGATGCG CGGTTCACGG CGGCGCAGCT GATGGTCCCG
ACCTTCGGCA ACCACCGGCT GCGCGTGACG CTGGAATGCG TCGGCAGCGG CGCGTCGGTG
CGGGAGCGCT ACCAGCACGA CCCGCGGATC CTCGACGTGC TCGCCTACTT CGACGCCGCG
ACCGCCGCAC GCCACGTACA GATCCCGGTC CAGGCGGTGC CCGCGCTGTT CGACCCCGCA
GTACCGCCGC CCGGCCAGTT CGCCGTCGTG AACGCCCTGG CCGGGCCGGT CGAGACACAG
GTGGCGACCG CCGGGCACTT CACGGACTAT CCCGAGTACG AGCAGGAGAT GCTGGAACTC
GGACGCGCCA CCAAGCAGTT CTTCGCCGAG TAG
 
Protein sequence
MKIDRLSQSA GVPQHPFPFD PAYGLDLDGL LKVAAPDTVP ADFAEFWQDM YRRALATPVD 
PRLGAKAGST AAGLDVFEVS FTSLGGIRIG GWIVVPPDGV VERGFVVGHG YGGRDEPAPE
LPATDAAGIY FVARGLPTKS LLSGVPSEAP GHVLQGIESR ADYIIGGCVA DLWCAATALT
ELFPATARRL DYTGVSFGGG TGALALPWDA RFTAAQLMVP TFGNHRLRVT LECVGSGASV
RERYQHDPRI LDVLAYFDAA TAARHVQIPV QAVPALFDPA VPPPGQFAVV NALAGPVETQ
VATAGHFTDY PEYEQEMLEL GRATKQFFAE