| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5833 |
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| Symbol | |
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| ID | 8337194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6737218 |
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| End bp | 6740031 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644958937 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003116532 |
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| Protein GI | 256394968 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGTAC GCGCCTCGGA CACCGATCCG ATCGCCATCC CCGCCGCCTT GCAGCGCGGC
GTGCTGGCGA TCCTGCTCTC GCGCGCGAAC CTGGTCGTCT CCCGCGACGA ACTGGCCGAA
ACCCTGTGGG ACGGCCAGAA TCCCGGCACG GCGCGGACCA CGCTGGCCGC GTACGTCTCG
CGGCTGCGGC GCGTCCTGGG CCCGGACGCC GGCCGGCGGA TCGGCACCCG GCCGCCGGGA
TACGTGATCG AGATCGACGC CGAGGAGTAC GACTGCGCCC GCGCCGGGGA TCTGCACGCC
CGGGCGCGCG CGGCGGCCGA GCGCGGTGAT TGGGCGGCGG TGCAGGGCCT GGCCGCCGAC
GGGCTGCGGC TGTGGCGCGG GACGCCGTAC CAGGACGTGC CGGTGCCGCG GCTGCACCGG
GAGGACGCCG CCGCGCTGGA CGCGGTGCGG GTGCAGCTGA CCGAGCTGAC CGTGGAAGCG
GATCTGCGGC TGGGGCGCGG CGACAGCGCC ATCAGTACCC TGATGCGGCT GACCGAGCAG
GAGCCGCTGC GGGAGAGCTT CTCCGAGAAA CTGATGATGG CGTTGGCCGC GCAGGGCAGA
CGCGCCGAAG CCCTCGCCGT GTTCCACCGG GCGCGCAAGG TGCTCCGCGA GAATCTGGGT
ATTGATCCGG GACCGGATCT GGCTCGCGCG CATCACGACG TGCTGGCGGC TTCCGGCGGG
GACCGCCCGG CGTCGGCGGC GGCGTCGGCA GCAGCAGCGT CGGCAACGGG ATCGGCGGCG
GCCTCACCGG AGCGGATCCG AGTCCGCGGA CCGCGACAGC TCCCGCCGGC CGCCCGGCAC
TTCACCGGCC GGGAAGCGGA GCTGGCGGCG ATGGACGAGG CCGCGGCGTC CGGCGAGGTG
CTGGTCGTCA GCGGCCTGGC CGGCGTCGGC AAGACCGCGC TGACCACGCA CTGGGCCCAC
CAAGCCGCGC CGCGCTACCC CGACGGCCAG GTGTTCGTCG GGCTGCACGG TTTCGACCCG
CACAGCGTGC CGATGACCGC GCACACCGCG TGTTCGATCC TGCTGGAGTC CCTGGGTCTG
GCCACCTCGG AGATCCCCGC CGATCCCGAC GCGCGCACGG CGCTGTACCG GACGGTCGTC
GCCGGCCGGC GGCTGCTCCT GGTGCTGGAC GACGCGTGGG ACGCCGCGCA GATCAGACCA
CTGATTCCGG GTACGGCCGG CAGCCAGGTC GTGGTGACCA GCCGCAACCG GCTCGCCGGG
CTGGTCGCCG CCGACGGCGC GCGGCCGATC CTGCTGGCGC CGCTGGACAA CGGCCGCTCG
ATGGAGTTGC TCGCGCGGCG CTCGGGAATC CGGCCGCGCC CTGACGAGCC GGCCGACACC
GCCGCCGCCG AGGCGCTGGC TGCGGCATGC GCCGGATTGC CGCTGGCGCT GACGATCGCG
GCAGCCCGGC TTCAGCTGGA CCCGGACCTG TCCTGGTCGG CGCTCACCGA GCGGCTGCAC
GACCGCCGCG GCGCGCTGTC GACGCTGGAC GTCGGGGAGG CCAGCGGGAG CCTGCGTGCC
GTGTTCTCGA TGTCCTATCA GCGGTTGAGC CGATCGGCAG CGGCGTTGTT CCGACTGCTC
GGCATCCATC CGGGCCCTGA CATCGCCATG GCCGCGGCCG TGTCGTTGGC GGGCAGCGCC
GACACCTCGA GCACCGAGCA GGCGCTCGAG GAACTCCTGA GCGCCAGCCT GCTGCACCGG
CACGCCGGCC GGTTCCGGTT CCACGATCTG GTCCGTGCCT ACGCCGCCGA AACAGCACTC
GAAGACTCCC CCGAGGTACG CACCGCCGCG CGTGTGCGCA TCCACGACCA TTGCCTGCGC
TCGGCGATCG AGGCCGACCG TATGCTGCGC CCGACGCGCG AACCGCTGAG CCTGCCGGCT
CCGGTGCCCG ACGTGCGCCC GGAGTCCTTC GCCGACGTCG CCGCAGCCAC GGCGTGGTTC
CAGGAGGAAC GCCAGGTGCT CGCAGCGGTG GTCGCCTTGG CCTCGCGCGA GCAGGACGAC
GAGTACGCGC ACCGCCTGCC GTGGGCTATC AGCACCTACC TGAACCGCCG GGGCGAATGG
CCCGCGCTGG CCGAACTCCA CCTCCTGGGC GCCGAGGCCG CCGACCGCAC CGGCGACCCC
CGAGCCCGGG CGCGCACGCA CACCGACGCC TCCAGCTTCC TGCTCCAGAT CCTCTCCTTC
GACGAGGCGC GGCGGCATCT GGAACTGTCG ATGGCGCTGT GGCAGGAACT CGGCGACCTG
CGCGGGGCAT GGCTGTCCGA GCACAACATG GGCCACCTGT GCCACAAGGA GGGCCGGCAC
GCCGAAGCCG CCGAGCACGC ACGCCGCGCG CTGGAGCACG CCCGCGCCCG CGGCTGGGCA
CCGGACGTCG CGCTGGCCCT GTCCACCGCC GCGTGGAGTC TGACCCACTG CGACGACCAC
GCCGGGGCGC TGCTGTTGGC CGCCGAGGCG ATCGAGCTGG ACCGGTGCGC CGGGGACCGC
AACGGCGAGG CGCACGCGTA CGACACCGTA GGGCTGGCGT CGTTCCGCCT CGGCCGGTAT
CCCGAGGCCC TGGCCGCGTA TCACAAGGCA TTGCGGTTGT TCGAGGACCT CGGCGACATA
CGGTTCCGGG GCAGGGTCCT GATGCGCATC GGCCAGGTGC GGCGGGAAAG CGGGGAGACT
GCGGCGGCGC ACAGCGCCTG GAGCCAGGCG TTGAAGCTTT TCGAGCAGGT CGGGGCGCCG
GAGTCCGACG AGCTCCGGGA GATGCTGGAC GGGCTGGACG GTTCGGACTC CTGA
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| Protein sequence | MVVRASDTDP IAIPAALQRG VLAILLSRAN LVVSRDELAE TLWDGQNPGT ARTTLAAYVS
RLRRVLGPDA GRRIGTRPPG YVIEIDAEEY DCARAGDLHA RARAAAERGD WAAVQGLAAD
GLRLWRGTPY QDVPVPRLHR EDAAALDAVR VQLTELTVEA DLRLGRGDSA ISTLMRLTEQ
EPLRESFSEK LMMALAAQGR RAEALAVFHR ARKVLRENLG IDPGPDLARA HHDVLAASGG
DRPASAAASA AAASATGSAA ASPERIRVRG PRQLPPAARH FTGREAELAA MDEAAASGEV
LVVSGLAGVG KTALTTHWAH QAAPRYPDGQ VFVGLHGFDP HSVPMTAHTA CSILLESLGL
ATSEIPADPD ARTALYRTVV AGRRLLLVLD DAWDAAQIRP LIPGTAGSQV VVTSRNRLAG
LVAADGARPI LLAPLDNGRS MELLARRSGI RPRPDEPADT AAAEALAAAC AGLPLALTIA
AARLQLDPDL SWSALTERLH DRRGALSTLD VGEASGSLRA VFSMSYQRLS RSAAALFRLL
GIHPGPDIAM AAAVSLAGSA DTSSTEQALE ELLSASLLHR HAGRFRFHDL VRAYAAETAL
EDSPEVRTAA RVRIHDHCLR SAIEADRMLR PTREPLSLPA PVPDVRPESF ADVAAATAWF
QEERQVLAAV VALASREQDD EYAHRLPWAI STYLNRRGEW PALAELHLLG AEAADRTGDP
RARARTHTDA SSFLLQILSF DEARRHLELS MALWQELGDL RGAWLSEHNM GHLCHKEGRH
AEAAEHARRA LEHARARGWA PDVALALSTA AWSLTHCDDH AGALLLAAEA IELDRCAGDR
NGEAHAYDTV GLASFRLGRY PEALAAYHKA LRLFEDLGDI RFRGRVLMRI GQVRRESGET
AAAHSAWSQA LKLFEQVGAP ESDELREMLD GLDGSDS
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