Gene Caci_5825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5825 
Symbol 
ID8337186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6729126 
End bp6730427 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content67% 
IMG OID644958929 
Producthypothetical protein 
Protein accessionYP_003116524 
Protein GI256394960 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.952499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCTG TCACAGCGGA CGGGGCGACG ACACGCGAGC TGGAACGCAT GATGGCGGAG 
TTCCCGGATC TGCCGCCCGA GGCCATCGTC AAGCAGGACA TACTGCGGCA GGGCCTCGCG
TTCAGCCCGG ATGCGTTGCG CGTGGCCAGC GGCTACAAGC CCAAGGACTA CTTCATCTTC
ACCTTCGACC TGGTGCCGGT GGCCGAGATG GCCAAGCACG CGCAGTTCCG GGCGCCGGAG
GAGATCCGGA TGACCGGCGG CCCGTACGAC CTGCGGCGGA CCGTGGTGTC GACGCGGGTG
GCGCCGGACA GCCCTTATGT GGTCGAGCTG CGGGAGGGCA AGCTCGCACT GAACTGCGAG
GGGGTGTTCC TGGCCGAGTT GGAGTTCCCG CCGATCCCCG GCTACTACGA GCACACGCTG
TCCTCGGGCA AGAAGATCAG CGAGATCGCC CCGGCCATCG AGTGGGGCTA CCTGGTCTAC
CTCACGGTGT ACCGGCTGTG CCAGTACTGG GGGCGGGACG AGGAGTGCCG TTTCTGCGAC
CTCAATGAGA ACTTCCGCCA GCAGCGCGCC AACGGCCGGG AGTACACGGC GGTGAAGGAG
CTCGACGACA TCGTCGAGGC GATGTCGCTG ATCAACAAGT ACGACGACGT GACCCGGGCC
TACACCGTCA CCGGCGGCTC GATCACCAAG AAGCTGGACG GCATGCGCGA GGGCGAGTTC
TACGCGCGCT TCGCCGAGGC CATCGAGTCC CGCTTCGCCG GCCGCTGGAT CCCCAAGGCG
GTGGTGCAGG CGCTGCCGCT GGACGAGGTC AAGATGCTCT TCGAGGCCGG CTACCGCATC
TACCACCCGA ACTACGAGGT GTGGGACGCC GACCTGTTCA GCTGGATCTG CCCCGGCAAG
GACCGCTACG TCGGCCGGGA CGAGTGGGTC AAGCGCATCC TGGACTCCGC GGACATCTTC
GGCCCGAGCA ACGTCATCCC GAACTTCGTC GGCGGCGTGG AGATGGCCGA GCCGCACGGC
TTCACCGACA TCGACAAGGC GATCGCCTCC ACGGCCGAGG GCCTGGACTT CTTCATGAGC
CACGGTGTGA TGCCCCGCTT CACCACCTGG TGCCCGGAGC CGACCAGCAA CCTGGGCCGG
CAGACGGGCC CGTCGCTGGA GTACTTCGTG AAGCTGCTGT ACGCCTGGCG CGAGACCTTC
GAGAAGTACT CGCTGCCGGT GCCTCCCGGC TACGGCAGCC CCGGTCCCGG GAACGCCGAA
TTCTCGGTGA GCGCGTTCAT GGACGTCATC CGCACCAGTT GA
 
Protein sequence
MDAVTADGAT TRELERMMAE FPDLPPEAIV KQDILRQGLA FSPDALRVAS GYKPKDYFIF 
TFDLVPVAEM AKHAQFRAPE EIRMTGGPYD LRRTVVSTRV APDSPYVVEL REGKLALNCE
GVFLAELEFP PIPGYYEHTL SSGKKISEIA PAIEWGYLVY LTVYRLCQYW GRDEECRFCD
LNENFRQQRA NGREYTAVKE LDDIVEAMSL INKYDDVTRA YTVTGGSITK KLDGMREGEF
YARFAEAIES RFAGRWIPKA VVQALPLDEV KMLFEAGYRI YHPNYEVWDA DLFSWICPGK
DRYVGRDEWV KRILDSADIF GPSNVIPNFV GGVEMAEPHG FTDIDKAIAS TAEGLDFFMS
HGVMPRFTTW CPEPTSNLGR QTGPSLEYFV KLLYAWRETF EKYSLPVPPG YGSPGPGNAE
FSVSAFMDVI RTS