Gene Caci_5822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5822 
Symbol 
ID8337183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6726023 
End bp6727084 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content70% 
IMG OID644958926 
ProductDNA polymerase IV 
Protein accessionYP_003116521 
Protein GI256394957 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.127311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGCCA CCGACTGGGT GTTGCACGTC GACCTCGACC AGTTCATCGC CGCTGTCGAG 
GTCGCGCGGC GGCCGGAGCT GCGGGGTCGG CCGGTGGTGG TCGGCGGTGC GGGGGATCCG
ACGCGGCGGG GTGTGGTGGC GACGGCGTCG TACGAGGCGC GGGAGTTCGG CGTTCATTCC
GGGATGCCGA TGCGGACTGC TGCGAAGAAG TGTCCCGAGT GCGTCTTTCT GCCGGCTGAT
CGGGCCGCGT ATGAGGCGGT CTCGGAGCGG GTCATGGCCA CGTTGCGGGA GTTTCCGGTC
GTGGTCGAGG TGATGGGGTG GGATGAGGCG TTCGTCGGGG CGCGGACCGA CGACCCCGAG
GCGTTGGCTG CCGACATTCG CGAAGCTGTG CTCGGCGAGA CCGGGTTGTC TTGCTCCGTG
GGGATCGGCG ACAACAAGCT GCGGGCCAAG ACTGCCACCG GGTTCGCCAA GCCGGCCGGC
GTGCATCGGC TGACGCGGGA GAGCTGGGCG GCGGTGATGG GCGATCGTCC CACCGACGCG
TTGTGGGGCA TCGGGTCGCG GACCAGTAAG AAGCTCGCCG CGCTTGGTCT GCACACCGTT
GCCGAGCTGG CGCGCGCTGA TCGCGCGGTG CTCGCCGACC AGTTCGGGCC GAAGATGGGA
CCGTACTTCT GGCTCCTGGC GCAGGGCGCG GGAGACGCCG AGGTGACCGG CACGCCGCAC
GTCGCCAAGG GCCGCAGCCG CGAGACCACC TTTCAGCAGG ACATCGCCGA GCCCGCCGAA
CTGGCGGAGC ACGTGCGTCA GCTGGCACGC CAGGTGGCCC AAGACGTCGC GGACGAAGCA
CGGCCGGCGG CGCGCGTCGG GCTGAAGATC AGGTACGCGC CCTTCGTCAC CAAGACCCGG
AGCATCACGC TGCCGGCTCC GTCCTCCGAC GCCGAGGAGA TCGAGCGTGC GGCGTTGGAG
GTGTTCGAGC TGCTGGAGCT GGACCGGCCG GTGCGGTTGC TGGGGGTGCG GGTGGAGTTC
GTCGAGACAG ACGCGGGAAC CGTGGCCGAT ACAGTGTTAT GA
 
Protein sequence
MSATDWVLHV DLDQFIAAVE VARRPELRGR PVVVGGAGDP TRRGVVATAS YEAREFGVHS 
GMPMRTAAKK CPECVFLPAD RAAYEAVSER VMATLREFPV VVEVMGWDEA FVGARTDDPE
ALAADIREAV LGETGLSCSV GIGDNKLRAK TATGFAKPAG VHRLTRESWA AVMGDRPTDA
LWGIGSRTSK KLAALGLHTV AELARADRAV LADQFGPKMG PYFWLLAQGA GDAEVTGTPH
VAKGRSRETT FQQDIAEPAE LAEHVRQLAR QVAQDVADEA RPAARVGLKI RYAPFVTKTR
SITLPAPSSD AEEIERAALE VFELLELDRP VRLLGVRVEF VETDAGTVAD TVL