| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5793 |
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| Symbol | vanB |
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| ID | 8337154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6693075 |
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| End bp | 6694115 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644958897 |
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| Product | D-alanine--D-lactate ligase |
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| Protein accession | YP_003116492 |
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| Protein GI | 256394928 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0328939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGC TCAATATCGG CATCATGTTC GGCGGCTGCT CGGAGGAACA CCCCATCTCT
GTCAAGTCCG CACGGGAGGT CGCGAAGAAC CTCGACACCA GCAAGTACGA ACCCTTCTAC
ATCGGCATCA CTCGGGACGG CGCGTGGCGA CTGTGCGACG GCCCAGAGGA GAACTGGGAG
AACGGCGCGA GCCGTCCCGC CGTGGTGTCG CCGGACCGAG GCGCGCACGG ACTGCTCGTC
CTGGACCAGG GACGCTACGA AGCGATCCGC CTGGACCTGG TCCTGCCGGT CCTGCACGGC
AAGCTCGGCG AGGACGGCGC GATCCAGGGT CTGCTGGAGC TGGCCGGCAT CCCCTACGTG
GGCTGCGACG TACAGACCTC CGTCCTGTGC ATCGACAAGA CGCTCACTTA CCTCGTCATA
CAGAACGAGG GGATCGCGAC GCCGAGGTTC TGGACCCTCA CGCCCGACGA GAAGATCGAT
CCGAACGAGC TGCCCTATCC GGTATTCGTC AAGCCGGCTC GCTCGGGGTC TTCGTTCGGC
GTCAGCAAGG TGTCCGGCAA GGACGAGCTG TCCGGCGCCA TCGAGGAGGC GCGGCTGTAT
GACGCCAAGG TGCTCATCGA GGAGGCGGTC GTCGGCAGCG AGATCGGCTG CGCGGTCCTG
GGCACCGGCG AGGATCTGCT CGTCGGCGAG GTGGACCGGG TCGCGCTGAC CCACGGCTTC
TTCAAGATTC ACCAGGAGAG CGCGCCGGAG ACCGGTTCGG AGAACGCGAC GTTCATCGTC
CCCGCCGACA TCCCGGCGCA GTCGCGCGCA CTGATTCAGG AGACTGCGAA GCTCGTCTAC
CGCGCTCTGG GTTGCCGCGG GCTGTCGCGG GTCGACTTCT TCCTGAAGGA GGACGGGACC
GTGGTCCTCA ACGAGGTCAA CACGCTCCCC GGCCTGACCT CCTACAGCCG CTACCCGCGG
ATGATGGCGG CCGCCGGATT CCCGATGTCC GAGGTCATCG ACCGGTTGGT GGCGGTGACG
ATCGCGGGGG ACCTCCGGTG A
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| Protein sequence | MDKLNIGIMF GGCSEEHPIS VKSAREVAKN LDTSKYEPFY IGITRDGAWR LCDGPEENWE
NGASRPAVVS PDRGAHGLLV LDQGRYEAIR LDLVLPVLHG KLGEDGAIQG LLELAGIPYV
GCDVQTSVLC IDKTLTYLVI QNEGIATPRF WTLTPDEKID PNELPYPVFV KPARSGSSFG
VSKVSGKDEL SGAIEEARLY DAKVLIEEAV VGSEIGCAVL GTGEDLLVGE VDRVALTHGF
FKIHQESAPE TGSENATFIV PADIPAQSRA LIQETAKLVY RALGCRGLSR VDFFLKEDGT
VVLNEVNTLP GLTSYSRYPR MMAAAGFPMS EVIDRLVAVT IAGDLR
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