Gene Caci_5784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5784 
Symbol 
ID8337145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6684028 
End bp6684249 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content68% 
IMG OID644958888 
Productputative signal transduction protein with EFhand domain 
Protein accessionYP_003116483 
Protein GI256394919 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[R] General function prediction only
[T] Signal transduction mechanisms
[Z] Cytoskeleton 
COG ID[COG5126] Ca2+-binding protein (EF-Hand superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACAGC ACGGGAAGGC ACCCGAGGAC GTGGAGAAGG TCTTCCGCCT CTTCGACCTG 
GACGGCGACG GCAGGATCAC GGCTGCGGAG CTCAAATCGG CGCTCGCCGA ACTCGGCGAG
GACGTCACCG AGGAGGACGC CGCCGAGCGG ATCGGCTCCG GCGACACCGA CCACGACGGG
ACGATCAGCC TGGACGAGTT CCGGGCTTTG ATGGCGGGCT GA
 
Protein sequence
MGQHGKAPED VEKVFRLFDL DGDGRITAAE LKSALAELGE DVTEEDAAER IGSGDTDHDG 
TISLDEFRAL MAG