| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5767 |
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| Symbol | |
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| ID | 8337128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6665969 |
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| End bp | 6667654 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644958871 |
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| Product | glycosidase PH1107-related |
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| Protein accession | YP_003116466 |
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| Protein GI | 256394902 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2152] Predicted glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.150112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCC TGCGCCGAAT CCTGCGCCGG CTGCGCCCGG ACAGACCCGG GCGCCGTTCG
CCGGCGCGTC TTCTGGCCCT GATGGGCCTG TTGGCGGCTT CGCTGATAGG TCCCGCGACG
GCCTCGCACG CGTCCGACTA CACCTCTTCC AACCTGCCGG ATTGGGCCAT CGGTCCGTTC
ACGCGGCAGG CCCAGCCCAC TCCCGCGCCG GTGCTGAGCC CCACCGGTAC CGGCTGGGAA
TCGCAGCATG TGCTGAACCC CGGGGTCGTG TACCGCAATG GCGCGTACCA GATGCTCTAC
CGTGCCGACG GCGGGGGTCC GGACCAGATC GGGCACGCGA CCAGCACCGA CGGGCTGCAC
TTCACCCGGG ACGCGGCGAA CCCCGTGATC CAGGACAATG TGCTGCCCTA CGAGAGCGGC
GGGGTCACCG ACCCGCGGCT GTACGAGCTC AACGGCACCT ACTACAGCTT CGTGGCCGCG
TACGACTGGT CGAAGAGCCC GCCGCAGACG ATCATGGAGA CCACCTCGAC GGACCTGGTG
CACTGGACGA CGGCCGTGCC GATCGTGCAC ACCAACTACG ACCCCGCGGT GGTCACCGAC
GGCAATGACA CGCCGGTGCT GATGAACACG CAGTACGGGC CCAGGTACGT CATGTACTAC
GGCGACGCCG ATCCGGCCAA GGGGCGGTTC GTCGCCTACT CAACCGATAT GAAGACCTGG
ACCAACAACA CGCCGTTCGA CATGCACTTC CCGGCGAACT ACACGCCCTG GGAGATCTGT
GTGACGGTGA CCGACTACCA GACCGTCGCC GGCGGTCCGG TGAACCACAA CATCGTGATG
TTCGTGGCCG GGACGCTGAT GGCGCACGGA CGCTGGTACT ACGGCGTCAG CGAGGTCGAG
TTCTCCGGCA CGAACCTGAC CCAGCAGATC GGGCAGCTCA CCGAGGCCGT GCTCAGTCCC
TCGACGCCGT ACGAGATCAA CGGCCGCACC CAGAACACGA TCTTCATGAA CTCGATCCTG
TTCCACAACG GCCAGTGGTC CATGTACTAC GGCGCCGCGG ACACCGTCAT CGGCCTGGCG
ACCGCGCCGC TGCGGCCCAG CGCGCAGAGC CCGTTCAGCA CGACCGGTTT CGAGAACGCG
AACCGCTACC CCGATTGGGC TGATGCGGTC GACTCCGGTG GCGGCCAGGC CGGAGGCATC
AGCAATGTCA CCGGCTATCC CGGATACGGG CTGGCCGGAC CGGAAGCCAG TATGCGGCAG
GAGACCGCGC ACGGCGGCTC GTCGGCGCTG ATGTACTCCG GAGCGGCCAC CGGCGCGGCG
AACAACTACG CGTATATGCA ACTGTTCGAC ACCTCGGCGC ATCCACCGGC CGTCGACGCG
AATACGACGC TGTCGTACTG GATCTATCCG CAGAACTCTG CGAACAGTAC GTGTGTGGCG
TTGGACGTCG TGTTCAGCGA CGGCTCGGCG CTACGGAACC TCGGCGCGAC CGATCAGAAC
GGAAACCGGC TGCATCCGGC CGGCCAGTGC GGACACCTGG CTCTGAACCA ATGGAACCTG
GTGACCGCGA AGATCGGGAC GGCGGCCGCG GGCAAGACGC CGGTGCGCAT CGATCTGGGA
TATGACCAGC CTGGCGGTAA CGGTGGCTAC CGCGGCTACG TCGATGACAT CAGCCTGACC
GGCTGA
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| Protein sequence | MKLLRRILRR LRPDRPGRRS PARLLALMGL LAASLIGPAT ASHASDYTSS NLPDWAIGPF
TRQAQPTPAP VLSPTGTGWE SQHVLNPGVV YRNGAYQMLY RADGGGPDQI GHATSTDGLH
FTRDAANPVI QDNVLPYESG GVTDPRLYEL NGTYYSFVAA YDWSKSPPQT IMETTSTDLV
HWTTAVPIVH TNYDPAVVTD GNDTPVLMNT QYGPRYVMYY GDADPAKGRF VAYSTDMKTW
TNNTPFDMHF PANYTPWEIC VTVTDYQTVA GGPVNHNIVM FVAGTLMAHG RWYYGVSEVE
FSGTNLTQQI GQLTEAVLSP STPYEINGRT QNTIFMNSIL FHNGQWSMYY GAADTVIGLA
TAPLRPSAQS PFSTTGFENA NRYPDWADAV DSGGGQAGGI SNVTGYPGYG LAGPEASMRQ
ETAHGGSSAL MYSGAATGAA NNYAYMQLFD TSAHPPAVDA NTTLSYWIYP QNSANSTCVA
LDVVFSDGSA LRNLGATDQN GNRLHPAGQC GHLALNQWNL VTAKIGTAAA GKTPVRIDLG
YDQPGGNGGY RGYVDDISLT G
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