Gene Caci_5738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5738 
Symbol 
ID8337099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6617686 
End bp6617964 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content70% 
IMG OID644958842 
Productprotein of unknown function DUF167 
Protein accessionYP_003116437 
Protein GI256394873 
COG category[S] Function unknown 
COG ID[COG1872] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.591706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGAGC TCCGGATTCC CATTCGCGTG AAGCCCGGGA GCTCGCGCAC GAAGGTGGGC 
GGACGGCACG GCGAACGGTC ACTCATCGTG GCCGTCACGG CCAAGGCGGT CGACGGCGCG
GCGACCGAGG CGGCGCTGCG AGCGGTCGCG GAGGCGCTGG GAATGCCGCG CCGAGCGGTC
CAGTTGATTA CCGGAGCCAC GTCGCGCGAC AAAGTCTTAG GGGTTTCTTC GGAAGACCCG
GACACCGTGC GCGAGCTGGT GCGGGACCTG CTCGGCTGA
 
Protein sequence
MEELRIPIRV KPGSSRTKVG GRHGERSLIV AVTAKAVDGA ATEAALRAVA EALGMPRRAV 
QLITGATSRD KVLGVSSEDP DTVRELVRDL LG