Gene Caci_5724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5724 
Symbol 
ID8337085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6606086 
End bp6606481 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content72% 
IMG OID644958828 
ProductEndoribonuclease L-PSP 
Protein accessionYP_003116423 
Protein GI256394859 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA TCCAGCGGAT CGGCTCCGAC GGGCAGTGGG AGAACGAGTA CGGCTACTCC 
CGGTTGGTCG TCGCCGGCCC TCACGCGTGG GTAGCGGGGT GCACGGCGAC CGTCGACGGC
CAGGTGCAGG GCAACGGGGA CCCGTACGCC CAGATGAAGG TCTCGCTGGA GATCGCCCGC
AAGGCGCTGG AACAGGCCGG GTTCGGGCTG CACGACGTGG TCCGGACGCG CTGGTACGTG
GTGCACGCCC GGGACATCGC CGAGGTCGGC CGGGCGCACG GCGAGGTCTT CGCCGAGGGC
CGTCCGGCGG CGACCGCGCT GGTGGTCTCC GGGCTGATCG ACCCCGGGAT GCTGGTCGAG
GTGGAGCTGG ACGCCTATCG CGGCGAGTCC GCGTAG
 
Protein sequence
MSSIQRIGSD GQWENEYGYS RLVVAGPHAW VAGCTATVDG QVQGNGDPYA QMKVSLEIAR 
KALEQAGFGL HDVVRTRWYV VHARDIAEVG RAHGEVFAEG RPAATALVVS GLIDPGMLVE
VELDAYRGES A