| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5708 |
|---|
| Symbol | |
|---|
| ID | 8337069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6589512 |
|---|
| End bp | 6590051 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644958812 |
|---|
| Product | DoxX family protein |
|---|
| Protein accession | YP_003116407 |
|---|
| Protein GI | 256394843 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.673039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCGA TGGCTTCCAA GGCCTCCGCC CCGGGCAAGG ACGCGCCCGC GACCGGCGGC
ATCCGCGGTC TCCTGGACAC CAACCAGCAG TGGATCAGCC TCGGCATGCG GCTGCTGCTG
GCCGCGATGT GGCTCTACTA CAGCCTGGGC AAGCTGGGCT CGCCGGAGAG CAACGCGCAG
AGCGTGCGCG ACTTCAAGAT CCTGCCGGAG TCGCTGGTCA CGCCGTTCGG CTACGCCCAG
CCGTACTTCG AGATGGCGCT GGGCATCCTG CTCATCCTGG GTCTGGGCAC GCGGCTGGTG
GCGATCTTCT CCGCGCTGCT GCTGCTGGTC TACATCGGCG GGATCATGTC CCTGGGCGCC
CGCGGCATCG CGATCAGCTG CGGCTGCGGC GGCAGCGGCG GCCTGGTGCC CAAGGGCCAC
ACCCGCTACA CCCTGGACGT GCTGCGCGAC CTGCTCTACG TGCTCCCGGC GGCGTGGCTG
ATCTGGAAGC CGGCCTCCAA GCTCTCGCTG GAGCGCGCGC TGCTGGGTGA CCCGATCTGA
|
|---|
| Protein sequence | MTSMASKASA PGKDAPATGG IRGLLDTNQQ WISLGMRLLL AAMWLYYSLG KLGSPESNAQ
SVRDFKILPE SLVTPFGYAQ PYFEMALGIL LILGLGTRLV AIFSALLLLV YIGGIMSLGA
RGIAISCGCG GSGGLVPKGH TRYTLDVLRD LLYVLPAAWL IWKPASKLSL ERALLGDPI
|
|---|
| |