| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5700 |
|---|
| Symbol | |
|---|
| ID | 8337061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 6576216 |
|---|
| End bp | 6576875 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644958804 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003116399 |
|---|
| Protein GI | 256394835 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTACT CGTTAGTAGC TTTTTCGGTC CTGACAAATT CCCACGGTTC CGAACACAAC
TTTCGGCCAC CGTTCACCGT GTGTCTGTAT GGAATGAACC GTCTGCAACG GAGACAATTG
GCCTCCATGA CGACGCCTCC TCCCCCGGAG CCCCCCGAGC CCTCGGAGCC CTCGGAGTCC
CCGGAGCCGG ACCGGTCGCC GGAAGAGCCG GTTCAGCCTC CATCTCCTCC TCCCGCCGCT
CCGATCGAGC CTGACGCCTC CGCGGTCCAC CTGGGCCGCG ACGCCGAGCC GGAGCCCGGG
CCGGACCCCG GCCGCCCGGC GCCGGACCAG CAGTTCCCGC AGTACCCGGC GCCGCCGCCG
CTGCCGCCGG AGGCGTATCC GACCTACGGC GGCGGCCAGG GCTACGACTA CGGCGGGTTC
GGCGCTCCCC CCGTCCGGCG CCGCAACGGC ATGGGCGTCG CCGCCCTGGT CCTGGGCATC
GCCGGGTTCC TGGTCGGCCC GACGAGCATC CTGGCGATCA TCTTCGGCCG GATCGGGCTG
AACCGGGTGG CCCGGGGCGA GGCCACCAAC CGGGGCGTGG CGCAGGCCGG GTTCGTGCTG
GGAATCGTCA CGCTCGTGCT GTGGATCCTG GGACTCATCC TGGTGGCGGC CCGGCACTGA
|
|---|
| Protein sequence | MSYSLVAFSV LTNSHGSEHN FRPPFTVCLY GMNRLQRRQL ASMTTPPPPE PPEPSEPSES
PEPDRSPEEP VQPPSPPPAA PIEPDASAVH LGRDAEPEPG PDPGRPAPDQ QFPQYPAPPP
LPPEAYPTYG GGQGYDYGGF GAPPVRRRNG MGVAALVLGI AGFLVGPTSI LAIIFGRIGL
NRVARGEATN RGVAQAGFVL GIVTLVLWIL GLILVAARH
|
|---|
| |