Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5684 |
Symbol | |
ID | 8337044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6557785 |
End bp | 6559218 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644958787 |
Product | inner-membrane translocator |
Protein accession | YP_003116383 |
Protein GI | 256394819 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACCT CGATCGCCGA GCTGTCGGCG CAGGTCCGGC AGCTGCGCCG GAACGACGCG TGGTGGAAGA ACCCGCGCTG GGGCCGGCTG CTCATCATCT TCGCCCTGTT CATGGTGCTC AGTCTGCTGA CGAACCAGGT CCAGGGCTCC TCCAGCAACT ACACGCTGGT CTTCAGGAAC AGCTGGTTCT CCGCGCGCGG CGCCCAGTTC CTGGTCGGCT CCGTGGTGGT CTGGGTGATC GCCGAGGCCT GGCGCGCCCG GGGACTGACG CAGATCGCCT CCCAGGCGAC CGCTCCGGTC CGGCGGGTCA GGAACATCGC CGCGCTGAAG AACATCTGGG TCAAGCGCGG CACGCTGCTG GCCGTGGTGG TCATCGCGAT CATGCTGCCG ACGATGGGCC TGTTCACCCT GCCGTACTTC CAGTCCGTGC TCTCCGACCA GGTCGGCGTG TACGTGCTGG CCGCGGTCGG GCTGAACGTG GTGGTCGGCT GGGCCGGCCT GCTGGACCTG GGGTACATCG CGTTCTTCGC GATCGGCGCG TACACCACCG CCATCTTGTC CGGCCGGCTG CCGATCGGCG CCGACGGCAA CCCCGAGGCA CACCCGCCGA TCCACCTGAA CCTGTTCTTC GCCTTCCCGA TCGCGGTCCT GCTGACCATG GCCGCCGGGC TCATCCTGGG CGCCCCGACG CTCCGGCTGC GCGGGGACTA CCTGGCGATC GTCACGCTCG GCTTCCACGA GATCGTGCTG AACATCGCCC GGAACAACCC GAAGAACATC ACCGGCGGCG CCCTCGGCGC GACCAGCATC CCGACGTTCC GGTTCAACCT GTTCGGCATC CACTACGACT GGAACACCAG CGATTCCAAA CCGTACTGGT ATCTGGCGAT CGGGCTGATC ATCGTCGTGG TCTTCGCCTT CCGGCGGCTG GAACACTCCA AGGTCGGCCG GACCTGGACC GCGATCCGCG AGGACGAGGT GGCCGCGGCC GCCTCGGGCG TGCCGACGGT GAAGTACAAG CTGATGGCCT TCGCGATCGG CGCCTCCACC TCCGGCTTCG CCGGCGTGCT GGCGACCGCG AAGATCACCG CGATCACCCC GGACAACTTC CCGCTGCCGT TGTCCATCTA CATCCTGGCC TACGTCATCT TCGGCGGCAT GGGCTCGCTG ACCGGCGTGA TCGTCGGCGC CTCGCTGATG ACCTTCCTGC CGTACTTCCT GCAGGGCCCG CCCTCGTGGT TCAACGGCGG GCACCCGGTG GTGGACCCCA AGGACATCCC GATGTGGGTC GGCGCGGTGC TGCTGGTCAT GATGATCTTC CGGCCGCAGG GTCTGATCCC GTCCAAACGG CGGGCCCAGG AGCTGGCGCA GGCCGAGCAC GGCGTCGGCG ACGCCGACGC GATGACCGAG ACGGCGGAAG GAGTGGCGCC GTGA
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Protein sequence | MTTSIAELSA QVRQLRRNDA WWKNPRWGRL LIIFALFMVL SLLTNQVQGS SSNYTLVFRN SWFSARGAQF LVGSVVVWVI AEAWRARGLT QIASQATAPV RRVRNIAALK NIWVKRGTLL AVVVIAIMLP TMGLFTLPYF QSVLSDQVGV YVLAAVGLNV VVGWAGLLDL GYIAFFAIGA YTTAILSGRL PIGADGNPEA HPPIHLNLFF AFPIAVLLTM AAGLILGAPT LRLRGDYLAI VTLGFHEIVL NIARNNPKNI TGGALGATSI PTFRFNLFGI HYDWNTSDSK PYWYLAIGLI IVVVFAFRRL EHSKVGRTWT AIREDEVAAA ASGVPTVKYK LMAFAIGAST SGFAGVLATA KITAITPDNF PLPLSIYILA YVIFGGMGSL TGVIVGASLM TFLPYFLQGP PSWFNGGHPV VDPKDIPMWV GAVLLVMMIF RPQGLIPSKR RAQELAQAEH GVGDADAMTE TAEGVAP
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