| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5662 |
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| Symbol | |
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| ID | 8337022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6530268 |
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| End bp | 6531317 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644958766 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_003116362 |
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| Protein GI | 256394798 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.342758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAATG GCGGCATGGC GGCCGGCACC GCCGGGCACA ACGCTGCGGT GGACGACAAC
CTGGGCCAGG GCGCCCCAGC CGATCACAGG CCAAGCGAGA ACACTGCGGC CAATCGCAGC
GGAAAGACCG TGACCCACCG CAGCGCGAGC CAAAGCACTG CCGCCGATCA CGCCCCGAGC
CAGCACGCCG CAGTCGATCG CAGCCTGAGT GAGACCGCCG CAGCCGACCG CAGCCCGAGC
CAGAGCACCG TGACCGAAGT CCGAGCCGCC ACCGCCGGCG GCCCGAGTAT CAGCGTCCAG
CCTCGCCGGA CGCGCGCGAC CGGCTATCTG GCCGTCGCCG GGGACTTGGC GCCTCGCGAC
CGTCGCGCGT CTGATGTGGA GGCGATCCTC TGCGATCTCG ATGACACGCT GTATCCGCAG
GCTGCGTGGC TCGATGGCGC GTGGAGTGCT GTGGCGGCGG CGGGTGCGCG GTGGGGCGTC
GAGGAGCGGG CGTTTCTGGC GGCGCTGCGG GCTGATGCGG CGGTGGGGTC GGCGCGGGGC
GGGATCATTG ATCGGGCGCT GGTGGATGTG GGGGTCGGGG GCGGGGCGGA GCTGGTTGCT
GAGCTGCTCG CCGCGTTTCG GGCGTATCGG CCTGTGCGGC TGGAGCCGTA TCCGGGGGTG
CGGGAGGCGT TGGTGCGGTT GCGGGTGGCG GGGGTGCGGC TCGCGGTGGT GACTGATGGG
GATGTGGAGG TGCAGGCTTG GAAGGTGCGG GCTTTGGGGT TGTCCGCTTT TTTTGAGTGC
GTGGTCGTCT CGGATGCGCT GGGGGGACGC GGGGTGCGCA AGCCGAGTGC GGTGCCGTTC
TTGGCCGCGG TGGAGGGGTT GGGGGTGCGG CCTGAGCGGT GTGTTGTGGT GGGGGACCGT
CCTGAGAAGG ATGTTATGGG AGCTCTGGGG GCTGATATCA GGGCTGTTCG GGTGAAAACG
GGGGAATATC GGCAGGTTGC CGATGTGGCA GGGACCTGGC ATACGGCTGC TGATTTTCCG
GCTGCCGTCG ACTGGTTGCT GCGGGAATGA
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| Protein sequence | MANGGMAAGT AGHNAAVDDN LGQGAPADHR PSENTAANRS GKTVTHRSAS QSTAADHAPS
QHAAVDRSLS ETAAADRSPS QSTVTEVRAA TAGGPSISVQ PRRTRATGYL AVAGDLAPRD
RRASDVEAIL CDLDDTLYPQ AAWLDGAWSA VAAAGARWGV EERAFLAALR ADAAVGSARG
GIIDRALVDV GVGGGAELVA ELLAAFRAYR PVRLEPYPGV REALVRLRVA GVRLAVVTDG
DVEVQAWKVR ALGLSAFFEC VVVSDALGGR GVRKPSAVPF LAAVEGLGVR PERCVVVGDR
PEKDVMGALG ADIRAVRVKT GEYRQVADVA GTWHTAADFP AAVDWLLRE
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