| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5658 |
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| Symbol | |
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| ID | 8337018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6522528 |
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| End bp | 6525050 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644958762 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003116358 |
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| Protein GI | 256394794 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.51688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGACACC CCCGCAAGAC CCTCGCGCTC GCTACCGCCG CCGCAGCGGT CGCGGCCGGG
GCGCTTCTGC CTTCGCCGCA GGCCTCGGCA GCCTCGGCAG TCTCGGCGGC GTCCGCGACC
CCCGCGTACC GCGTCAGCAT CGGCGCCGTG AACAGCTTCG CCTACCCTGA CGACACCCCG
GCGTCGGCGT ATCTCGATTC CGACGGCTCC TTCCACTTCC AGGAGTCGTA TTCGCTGTAC
GCCAAGACCG ACCCGCGCGC CTGGGAGTTC TACGCCGGGA CGGACTTCGA CGACGCGACG
CTGGACACCG GGCTGAGCAG CGCGGTGAAC CCGGCCGATC CGCAGGACAA GAACAACGAC
ACCACAGTGC GCTGCAACAA CAGCCCGACC GGGCTTGAGT CGACGTACAT GAACAACGGG
ACCGGCTACT ACTCGCAGCG CAACTACTGC GACCTGTCCG GGACGTGGGT CGACCCGGAC
AGCGGCGACT GGTACGGCTT GGTCCACAAC GAGTTCACGC CGCAGCCCTT CGGCGACGGC
CTGCACTACG ACGCCATCGA CTACGCCGTC TCGCACGACC ACGGCAAGAC CTGGTCGATC
CTCGGGCACG CGATCACCTC GCCGTACAGC ACGACCCGCA ACGACAGCGC CGCTTTCCCG
AACCAGACCT ACGACTACGG CGACGGCGAC CAGCGCCTGT TCGTCGATCC CGCCTCGGGC
TACTTCTACG TGTTCTACGG CTCGCGGGTC GTGAACAAGC CGGGCACCGG AGGCACGCAG
ACCGGCGGGC TGGCGCACGT CGCACGCGCC CCGATCAGCG GCAAGATGGC CGCCGGGACC
TGGCAGAAGT GGTACGACGG CGCCTGGACG CAGCCCGGCA TCGGCGGGCT GGAGAGCAAC
ATGGAGCCGG TGGACGCCGC GAACCCGACC GGCTACACCG CGCCGGCACA CGACTACAAC
CCGGCGAACA CCGGGACCGC CGACCAGCAG ATGGCCGCGG GCGAGCTGCC GGCCAAGTCG
CCGCTGTTCA TCATGAACAT CACCTACGAC GCCTACCTCG GGTTGTACAT CGGCGAGCCG
GAGACGGTCG GCCAGACCGG CAAGGAGCCG CAGCAGTTCT ACGCCACCGA CAACCTGGCG
ACGCAGAAGT GGCGCCTGAT CGGCGACTCG GGCAGCTATG TGTCAGGGTC CTGGTATCGG
TGGTTCGCTG ACGACGCCAA CAAGTGGAGC CCGACGATCG TCGGCGAGAC GTTCCGCTCG
TACTGCTCGA TCGCGTGCGC GACCTCCGAC GGGGAGTACG CGGACGTGAC GATCGGCAGC
TCGGCGCCGG CCAAGCCGGT GGTCGCACCG GGTCAGAACG TCGTCATCAA CAGCGGCAAC
GGCCGGGTGC TGGCGCAAAG CGCGGGCAGC TCGAAGGTGA CGTCGCTGGA CGCGTCCTAC
GGCTGGGCGC AGGCGGCGTG GACGATCGCG GCGACCGGCG ACGGCTCGTA CACCGTCGTG
AACGCCGTAT CCGGGGACGC GCTCGGGGTG GACTCCTCGA AGACCTCCTC GCGCGCCTGG
GGCACGACGC CGTCGGCGAC ACCGATCGGC GCCTCCGGTC CGACCGTGGG CCAGGAGTGG
TTCGCGGTAC CGAACACCTC CTCGCCGGGC TCCTTCCGGC TGGTGAACCG GGACAGCGGA
CTGGCGCTGG GGATGGCGTG GGACTCCGCG CGCTCGGCGG AGACCACGCC GGTGCGCTCC
TGGACCGACA CCTCCGGCAA CGCGGTCGGC GGCGGTCGGC AGCCCTCGGA GCAGACGCTG
ACCTTCTCCC CGGCGCATCC GGCGCAGGGA CCTGAGGTCG TGCACATGGC GACGCCGGGG
AACCAGAGCG GCGTGGTCGG CACGGCGGCG AGCGTGCAGG TGAACGGCAG CGACTCCAAG
GGCCGCCACC TGAGCTACAC GGCGACCGGC CTGCCCGCCG GCCTGTCGAT CAACGCCGGC
AGCGGTCTGA TCACCGGGAC GCCAACCGCT TCGGGCATGT CCACGGTGAC GGTGACCGCG
TCCTCCGGGC ACGTCTCGGC GAGCGCCACG TTCACCTACG CGGTGAGTCC GAAGCCTGTG
GACCTGTCGG GCGTGCACAC GCTGACGGTG TCGGGACAGG CGTTGCAGAC GCCGAACGGT
TCGAAGAACG GTGGCGACCA GCTGGTGACC GGCGCCGCGA CGGGAGCGGC GACTGGCGCG
GCGAGCCAGA AGTGGACGTT CGCCCGGCAG AGCGACGGCA GCTACACGCT GACGAACGGC
GACTCAGGCA TGTGTGCCGA CGACAACGGC GGCAATACGG CTGCGGGGAC AGCGGTGATC
CAGTGGTCGT GCACGGCGGC GGTGAACCAG CGCTGGAGTG CGACACAGCT GCCGTCGGGG
TTGTGGACGG TGAAGAACAA CCACACCGGA CTGCTGATGA CGACCGCTTC CACGGCTGCC
GGCGCGCTGG TGACGCAGGA GGCTGACACT GGGGCTGCGT TGCAGCACTG GACGCTGAGC
TAG
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| Protein sequence | MRHPRKTLAL ATAAAAVAAG ALLPSPQASA ASAVSAASAT PAYRVSIGAV NSFAYPDDTP
ASAYLDSDGS FHFQESYSLY AKTDPRAWEF YAGTDFDDAT LDTGLSSAVN PADPQDKNND
TTVRCNNSPT GLESTYMNNG TGYYSQRNYC DLSGTWVDPD SGDWYGLVHN EFTPQPFGDG
LHYDAIDYAV SHDHGKTWSI LGHAITSPYS TTRNDSAAFP NQTYDYGDGD QRLFVDPASG
YFYVFYGSRV VNKPGTGGTQ TGGLAHVARA PISGKMAAGT WQKWYDGAWT QPGIGGLESN
MEPVDAANPT GYTAPAHDYN PANTGTADQQ MAAGELPAKS PLFIMNITYD AYLGLYIGEP
ETVGQTGKEP QQFYATDNLA TQKWRLIGDS GSYVSGSWYR WFADDANKWS PTIVGETFRS
YCSIACATSD GEYADVTIGS SAPAKPVVAP GQNVVINSGN GRVLAQSAGS SKVTSLDASY
GWAQAAWTIA ATGDGSYTVV NAVSGDALGV DSSKTSSRAW GTTPSATPIG ASGPTVGQEW
FAVPNTSSPG SFRLVNRDSG LALGMAWDSA RSAETTPVRS WTDTSGNAVG GGRQPSEQTL
TFSPAHPAQG PEVVHMATPG NQSGVVGTAA SVQVNGSDSK GRHLSYTATG LPAGLSINAG
SGLITGTPTA SGMSTVTVTA SSGHVSASAT FTYAVSPKPV DLSGVHTLTV SGQALQTPNG
SKNGGDQLVT GAATGAATGA ASQKWTFARQ SDGSYTLTNG DSGMCADDNG GNTAAGTAVI
QWSCTAAVNQ RWSATQLPSG LWTVKNNHTG LLMTTASTAA GALVTQEADT GAALQHWTLS
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