Gene Caci_5640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5640 
Symbol 
ID8337000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6500218 
End bp6501234 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content72% 
IMG OID644958744 
Productpeptidase M48 Ste24p 
Protein accessionYP_003116340 
Protein GI256394776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0502519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCCG TGCTCCTCCT GGTCGTCTAC GCTCTGGCTG TGGCGGTCCT CGCCCCACCG 
TTGCTGGCCC GGCACTGGCC GTCGGACCGT GCTCCGCGTC TGACGGTGAC GCTGCTGCAG
ATCCTGACCT GCTCGTTCCT GCTGGCCACC GTCGGCGCCG GGCTCGCGCT GGCGTTCACG
CTGGTCGAAG GACTCTCCGA ACTGTCGCCG GCCCTGGACT CCTGCGCCGA CCAGCTCCCG
GTCACCGACC ACGGCTCCCT CGGTACGGCC CTGGGCCACC TCGGCTGGAT CTCCGCGGTC
CTGCTCTCGG CCCGCCTGCT CTACTGCCTG ACCGCCACCT TCGGCACCGC GCACCGCCGC
CGCCGCGAGC ACAGCCAGAT GCTCCGCATG CTCGCCAAGC GCGACGACGA CCTCGGCGTC
CTGGTCCTGG ACCACCCGTC CCCGGCCTGC TACTGCCTCC CCGACGACGT GGTGATCACC
ACCGGCGCCC TGGAACGCCT GAGCGCGAAG CAGCTGGAGG CGGTCCTGCT CCACGAGCGC
GCCCACATGT CCGGCCGCCA CCACCTGATC ATCGCCCTGG CCACCGCCAT CCGCCGCACC
ATGCCGCACA TCAAGCTCCT GGCCTACGCC GAACGCGAAA CCCGCCGCCT GGTCGAACTC
ATCGCCGACG ACGCCGCCGT GGCCCGCACC GGCGCCCCCA CCGTCGCCGC AGCCCTCGCC
GTCATTGGCA CAGCCCACGC CGAAGACGCA CCCCCGGAGT ACAACCCGGT CCCCGAAACC
GCCCTCGCCA TCGACTCCTC CCCCACCCTC CGCCGCATCC GCCGCCTCCT GCGCCTCGAC
CAAACCCTGA CCCGCCGCAC CCACGCCCTG GTCATCGCCG CGACAACCGC AGCCACGGTG
TTACCGGTCG CGCTCCTGGC AGTCTCCGGC GCGACCCTCT TCCGCCCCTG CCCCCCGGAT
CTGGACAGCG GCTGGTCGCC GGCGGTGGTG ATGTCGGTGG CCGCGGACGG GAGTTAG
 
Protein sequence
MTAVLLLVVY ALAVAVLAPP LLARHWPSDR APRLTVTLLQ ILTCSFLLAT VGAGLALAFT 
LVEGLSELSP ALDSCADQLP VTDHGSLGTA LGHLGWISAV LLSARLLYCL TATFGTAHRR
RREHSQMLRM LAKRDDDLGV LVLDHPSPAC YCLPDDVVIT TGALERLSAK QLEAVLLHER
AHMSGRHHLI IALATAIRRT MPHIKLLAYA ERETRRLVEL IADDAAVART GAPTVAAALA
VIGTAHAEDA PPEYNPVPET ALAIDSSPTL RRIRRLLRLD QTLTRRTHAL VIAATTAATV
LPVALLAVSG ATLFRPCPPD LDSGWSPAVV MSVAADGS