| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5623 |
|---|
| Symbol | |
|---|
| ID | 8336983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6482753 |
|---|
| End bp | 6484033 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644958727 |
|---|
| Product | Lysozyme |
|---|
| Protein accession | YP_003116323 |
|---|
| Protein GI | 256394759 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.700904 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.234327 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACCC CAGGCCCGGG CCGCCGCCGC ATGGCGGTGC GGTCCGGCGC ACTGCTCGTC
GCCGCGATAG CCGCCACCGC CACCGCGCTG TCGCACAGCG CCTCGGCCAG CCCGCAGGCG
GCGGCCGCCG GCAGCAGCGT TTTCTCGGTC GCCCCGTACG TCGACATGTC CAACGGCCAG
GAGCCGGTCC TGGACACCGC GATCACCGGC CACGGCCTGA AGGCTTACAC CGCGGCCTTC
ATCATCGGCG TCGGCTGCAA CCAGGAGTGG GGCGACACCC TCCCGGTCGG CAACGACTCC
TTCACCGACC CCGAGATCGC CCGCGCCAAG TCCGAGGGCG CCTCGGTCAT CATCTCCTCC
GGCGGCGCCG CCGGCGAGGC GCTGGCCTGG ACCTGCACCA ACCAGTCCTC GATCCAGGCC
GGCTATCAGG CGATCATCAG CGACTACGGG GTGAAGCAGC TCGACTTCGA CGTCGAGGGC
GCCGCCGTGG CCGACCAGAG CGCGGCCGCG CGGAACTTCA CCGCGATGAA GGCGCTGAAG
TCCGCCAACC CCGGCTTGCA GTTCTCGATG ACGCTGCCGG TGCTGCCCTC GGGTCTGACG
CAGGACGGCG TCAACATCCT GCAGACCGCC AAGAACAACG GCGTGAAGAT CGACGTGGTC
AACCTGATGA CCATGGACTA CTACCAGGGC CAGCAGGACA TGGGCGCGGC GGCGGTCAAG
GCCGCGCAGA GCACGCTGGC GCAGATGAAG GCCGTGGACT CCAGCTACAC CTACGCCAAC
GTCGGCATCA CGCCGATGAT CGGCGTGAAC GACGACGGCT CGGTGTTCAC CGCGGCCAAC
GCCGCCACCG TCGAGCAGTT CGCCTCCGCC AACGGCGTCG GGCGGCTCGC GTACTGGTCG
ATCGACCGCG ACCAGCCGTG CCCCGGCGGG TCCGGCGGCG GTGCCTCCTC GACGTGCAGC
GGCGTGGGCA ACGCCAAGCT GGCCTTCGCG GACGCGTTCG TCCCGTACAC CGGTAGCGGT
GGCGGGACCG GCGGGACCAC GGGCGGCACG ACCGGTGGCA CGACGGGCGG GACCACCGGT
GGAACGACCG GCGGGACCAC TGGCGGAACC ACCGGCGGCG GTAGCTGTTC GGCCGCGCCG
TGGAGCGCGA GCACCTCGTA CGTGCCGAAC GACGTCGTGT CGTACAACGG CCACTCGTGG
ACCGCGACGT ACTGGTCGAC CGGTGTGACG CCGGGCTCGG CCATCGCATG GAACATCTGG
AAGGACGACG GCGCCTGCTG A
|
|---|
| Protein sequence | MKTPGPGRRR MAVRSGALLV AAIAATATAL SHSASASPQA AAAGSSVFSV APYVDMSNGQ
EPVLDTAITG HGLKAYTAAF IIGVGCNQEW GDTLPVGNDS FTDPEIARAK SEGASVIISS
GGAAGEALAW TCTNQSSIQA GYQAIISDYG VKQLDFDVEG AAVADQSAAA RNFTAMKALK
SANPGLQFSM TLPVLPSGLT QDGVNILQTA KNNGVKIDVV NLMTMDYYQG QQDMGAAAVK
AAQSTLAQMK AVDSSYTYAN VGITPMIGVN DDGSVFTAAN AATVEQFASA NGVGRLAYWS
IDRDQPCPGG SGGGASSTCS GVGNAKLAFA DAFVPYTGSG GGTGGTTGGT TGGTTGGTTG
GTTGGTTGGT TGGGSCSAAP WSASTSYVPN DVVSYNGHSW TATYWSTGVT PGSAIAWNIW
KDDGAC
|
|---|
| |