Gene Caci_5618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5618 
Symbol 
ID8336978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp6477107 
End bp6477715 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content73% 
IMG OID644958722 
Productbeta-lactamase domain protein 
Protein accessionYP_003116318 
Protein GI256394754 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.541776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.23712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTACC ACGGCATCGT CCACGCCGGC GGCCCGCCGG CCGTCCACGA ACTCGCGCAG 
CTGATCGTCA CCAAGATCGC GGTCGGCCCG CACGCCGCGA ACTGCTACCT CCTGCGCGAC 
CGCCTCACCG GCGAGCAGCT CCTCATCGAC GCCGCCGACG ACGCCCCAGT CCTGATCCAG 
CTGGTCAACG GCGACCTCGC GGCCGTGATC ACCACCCACC CCCACCGCGA CCACTGGCGC 
GCCCTCGCCG AGGTGGCGGC AGCCACCGGC GCGGCGACGA TGGCCGGCAC CCACGACACC 
GGCGCCATCG AGGTCCCCAC CACAGTGCCC CTGGCCGACG GCGACAAGAT CCCCCTCGGC 
CGCTCCCACC TGACAGCCAT GCATCTGGCC GGCGACACCC CCGGCGCTCT GGCCCTGCTG 
TACGACGATC CCAAGGGGCA TCCGCACCTG TTCACCGGCG ACTGCCTGAC CGGCGCCGAG 
CCGCACGCGC CGAAGCCGGC CGAGCTGCTG ACCGGCGCCC TGGCCGCGCT ACCGGACGAG 
ACGTGGGTGT ACCCGGCGCG GGGGAACGAC TCGACGCTGG GCGCGGAGCG GGGCGGGTTG 
GGAGTTTAG
 
Protein sequence
MTYHGIVHAG GPPAVHELAQ LIVTKIAVGP HAANCYLLRD RLTGEQLLID AADDAPVLIQ 
LVNGDLAAVI TTHPHRDHWR ALAEVAAATG AATMAGTHDT GAIEVPTTVP LADGDKIPLG 
RSHLTAMHLA GDTPGALALL YDDPKGHPHL FTGDCLTGAE PHAPKPAELL TGALAALPDE 
TWVYPARGND STLGAERGGL GV