Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5601 |
Symbol | |
ID | 8336961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6457300 |
End bp | 6458103 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644958705 |
Product | ABC transporter related |
Protein accession | YP_003116301 |
Protein GI | 256394737 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.059714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.713913 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGGCA CCGCGATCGA GATCACAGAC GTCACCAAAC GGTTCCTCAC GCCCAAGGGC GAGGTGTTCA CCGCGATCCG GGATGTGTCG TTCACCGTCG AACCGGGCCA GTTCTGCGCG GTGGTCGGAC CGACCGGCTG CGGCAAGTCC ACGGCGCTGT CGCTGGTCTC GGGTCTGGAC CAGCCCAGCG AGGGCTCGGT CTGGGTGGAC GGCAGGCAGG TCGAGGGGAT CACCGACGGC GTCGGGTTCA TGTTCCAGGC CGACGCGCTG CTGCCGTGGA AGACGGTGCT GCAGAACGTC GCGCTCGGCC TGATCTTCCG CCGGGTCGGC AAGAAGGAGG CGGTCGAGCG GGCCCGCGAC TGGATTCGCC GGGTCGGCCT GGCCGGCTTC GAGGACCGCT ACCCGCACCA GCTCTCCGGC GGCATGCGCA AGCGCGTGGC GATGGCCGCG GCGTGGATCA CCGAGCCGCG GGTGCTGCTG ATGGACGAGC CGTTCGGCGC CCTGGACGTG CAGACCAAGG CGATCATGTC CACCGAGCTG ATGCGGCTGT GGGAGGGCTC GCGGCCCTCG GTCCTGTTCA TCACGCACGA CCTGGAGGAG GCCATCGCGC TGGCCGACCG GGTGGTGGTG ATGACCTCCT CCCCCGGCGG CGTGAAGGAG GTCTTCGACA TCGACATCCC GCGGCCGCGC GGCTCGGTGC AGGAGATCCG CTTCGGCAGC CGCTTCCTGG AACTGCACCA CGAGATCTGG GCCACGCTGC GCGACGAGGT CGAGCGCGCC TACGCCCGCA CGGCAGGAGT CTGA
|
Protein sequence | MAGTAIEITD VTKRFLTPKG EVFTAIRDVS FTVEPGQFCA VVGPTGCGKS TALSLVSGLD QPSEGSVWVD GRQVEGITDG VGFMFQADAL LPWKTVLQNV ALGLIFRRVG KKEAVERARD WIRRVGLAGF EDRYPHQLSG GMRKRVAMAA AWITEPRVLL MDEPFGALDV QTKAIMSTEL MRLWEGSRPS VLFITHDLEE AIALADRVVV MTSSPGGVKE VFDIDIPRPR GSVQEIRFGS RFLELHHEIW ATLRDEVERA YARTAGV
|
| |