Gene Caci_5601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5601 
Symbol 
ID8336961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6457300 
End bp6458103 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content70% 
IMG OID644958705 
ProductABC transporter related 
Protein accessionYP_003116301 
Protein GI256394737 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.059714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.713913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCA CCGCGATCGA GATCACAGAC GTCACCAAAC GGTTCCTCAC GCCCAAGGGC 
GAGGTGTTCA CCGCGATCCG GGATGTGTCG TTCACCGTCG AACCGGGCCA GTTCTGCGCG
GTGGTCGGAC CGACCGGCTG CGGCAAGTCC ACGGCGCTGT CGCTGGTCTC GGGTCTGGAC
CAGCCCAGCG AGGGCTCGGT CTGGGTGGAC GGCAGGCAGG TCGAGGGGAT CACCGACGGC
GTCGGGTTCA TGTTCCAGGC CGACGCGCTG CTGCCGTGGA AGACGGTGCT GCAGAACGTC
GCGCTCGGCC TGATCTTCCG CCGGGTCGGC AAGAAGGAGG CGGTCGAGCG GGCCCGCGAC
TGGATTCGCC GGGTCGGCCT GGCCGGCTTC GAGGACCGCT ACCCGCACCA GCTCTCCGGC
GGCATGCGCA AGCGCGTGGC GATGGCCGCG GCGTGGATCA CCGAGCCGCG GGTGCTGCTG
ATGGACGAGC CGTTCGGCGC CCTGGACGTG CAGACCAAGG CGATCATGTC CACCGAGCTG
ATGCGGCTGT GGGAGGGCTC GCGGCCCTCG GTCCTGTTCA TCACGCACGA CCTGGAGGAG
GCCATCGCGC TGGCCGACCG GGTGGTGGTG ATGACCTCCT CCCCCGGCGG CGTGAAGGAG
GTCTTCGACA TCGACATCCC GCGGCCGCGC GGCTCGGTGC AGGAGATCCG CTTCGGCAGC
CGCTTCCTGG AACTGCACCA CGAGATCTGG GCCACGCTGC GCGACGAGGT CGAGCGCGCC
TACGCCCGCA CGGCAGGAGT CTGA
 
Protein sequence
MAGTAIEITD VTKRFLTPKG EVFTAIRDVS FTVEPGQFCA VVGPTGCGKS TALSLVSGLD 
QPSEGSVWVD GRQVEGITDG VGFMFQADAL LPWKTVLQNV ALGLIFRRVG KKEAVERARD
WIRRVGLAGF EDRYPHQLSG GMRKRVAMAA AWITEPRVLL MDEPFGALDV QTKAIMSTEL
MRLWEGSRPS VLFITHDLEE AIALADRVVV MTSSPGGVKE VFDIDIPRPR GSVQEIRFGS
RFLELHHEIW ATLRDEVERA YARTAGV