Gene Caci_5594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5594 
Symbol 
ID8336954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6448643 
End bp6449392 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content71% 
IMG OID644958698 
ProductMethyltransferase type 11 
Protein accessionYP_003116294 
Protein GI256394730 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.709179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.912769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATG CGATCTTCGC CCACCCCCGC CTCGCAGAGA TCTACGACAC CTTCGACGGC 
GACCGCGCCG ACCTGGACGC CTACGTCGCG ATCACGGCCG AGTTCGCTGG TGGGAGGGCT
TCCGTCGTGG ATGTCGGCTG CGGCACCGGC AACCTCGCCG TCCGGCTCGC CGCGCTGGGG
CACGCCGTCG CCGGCGTCGA CCCGGCCGCC GCCTCGCTCG CCGTCGCGCG CGCCAAGCCG
CACGCGGACG CCGTCACCTG GATCGAGGGC GACGCCACCG CGCTCCCGTC CTTGCACGCC
GACATCGCGC TGATGACCGG CAACGTCGCG CAGGTCTTCC TCACCGACGA GGACTGGACC
GGAACCCTGC GCGCCATCGC CGCCGCCCTG CGCCCCGGCG GGCACTTCGT CTTCGAGACC
CGGCGTCCCG AGCGGCGCGC GTGGGAGGAG TGGACGGTCG ACAGCGCGCC TGTGGTGCGC
GAGGTTCCGG GCGTCGGCAT CGTAGAGGAG CGAAGAGAAG AACTCAGGGT CGACCTGCCG
TATGTGTACT TCCGCGGCGC TTATCGATTC CCCGACGGCT CCGTCCTGCG TTCGGAGTCC
ACCCTGCGCT TCCGCGACCG CGAGGAAGTG GAGGCGAGTT TGGCCGCGTG CGGCTTCGAG
ATCGTCGACG TGCGCGAGGC TCCGGACCGG ATGGGGAAGG AGTACGTCTT CATCACCCGG
ACGCAAGCGG GCCACCGGCC GAACCGGTGA
 
Protein sequence
MPDAIFAHPR LAEIYDTFDG DRADLDAYVA ITAEFAGGRA SVVDVGCGTG NLAVRLAALG 
HAVAGVDPAA ASLAVARAKP HADAVTWIEG DATALPSLHA DIALMTGNVA QVFLTDEDWT
GTLRAIAAAL RPGGHFVFET RRPERRAWEE WTVDSAPVVR EVPGVGIVEE RREELRVDLP
YVYFRGAYRF PDGSVLRSES TLRFRDREEV EASLAACGFE IVDVREAPDR MGKEYVFITR
TQAGHRPNR