Gene Caci_5567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5567 
Symbol 
ID8336927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6417514 
End bp6417834 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content63% 
IMG OID644958671 
ProductNIPSNAP family containing protein 
Protein accessionYP_003116267 
Protein GI256394703 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.470602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACCT GTGTCGTGGA ATACGTGATC GATCCGGCGA AGACCGAGGC GTTCGAGCGG 
TTCGGCCGGC GGTGGATGGA GCTGGTCGAC AAGCACGGTG GTACTCACCA CGGGTACTTC
CTGCCGTCCG AGGGCGCCAG CGACAAGGCG CTCGCGCTGT TCAGCTTCCC CAGCTTGGCC
GCGTATGAGG AGTACCGGAC CTTGTTCGGC CGCGATGCCG AGTTCATCGA GGCCGACCGT
ATTCGGGACG AGAGCGGTTG CGTGCTGCGC TACGAGCGGA CTTTCATGCG TCCTTTGCTG
CCTGAGACAC CCGAGCGATG A
 
Protein sequence
MITCVVEYVI DPAKTEAFER FGRRWMELVD KHGGTHHGYF LPSEGASDKA LALFSFPSLA 
AYEEYRTLFG RDAEFIEADR IRDESGCVLR YERTFMRPLL PETPER